Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2259 ATGAAGGAGAAAGCAGATTCCCCTGTTGGGGTTCTTGAGGACTACTTTCGAAGCTCAGAATCCGACACAAGTTCTTCCAAAGAACCCACCGTAGATTCTGAGGCTCAAGATAAGTCAAAATTTGCTTCTAAATGGCGTGGATTTCTGCAACATCTGACGACCAGGTCTAAAAAATCCTCACCTACCACCATGCATCCTCCTCTCAGTGTCCTCAAGCTGTCTAAGAGAATGAGCAGAAGCATGAGAGAGACTATTTTTCCAAGTTCCCGCTTAGGTGCAGATTCGTCTCTCCACAATTCACCATGGAAGATCTTTACACACAGGGAAATTCTACTCGCAACCAGTTCCTTCAGTCAAGAAAACCTTATCGGGAAGGGTGGGTATGCTGAAGTTTACAAAGGGTGCTTACCAGATGGTCAGCTGGTGGCTATTAAAAAGCTGACACGTGGAACCCAAGATGAGATTATAAGCGACTTCTTATCAGAACTGGGCATAATGGCGCATGTTAATCATCCCAATACTGCTAAGCTAGTTGGCTACGGCGTTGAAGGAGGCATGCACCTTGTTCTTGAATTCTCTGAAAAAGGAAGCTTAGCTTCAGTACTTCACGGTTCCAAGGAAAATCTGCCATGGTGCATTCGGTATGACATTGCGTTAGGGACGGCCAAGGGTATATTGTATCTCCACGAGGGCTGTCAAAGAAGAATTATCCACAGAGATATAAAGGCGGCAAATATCTTACTGACAGAGGATTACGAGCCGCAGATATGTGATTATGGGCTAGCAAAATGGCTGCCAGAGAACTGGACTCACCATACCGTTTCAAAATTCGAAGGAACCTTTGGTTATCTTGCTCCTGAGTACTTGCTTCATGGCATAGTAGACGAGAAAACAGATGTATTTGCTTTTGGCGTTCTGCTGTTAGAATTGGTCACTGGTAGGCGAGCCCTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCATTGTTGAAAAAGAACAGGATTAGGGAGCTGATAGATCCATCACTAGGTGATGCGTTCGATACACGGCAGATGAATCTTGTGCTATTGGTGGCTTCTTTGAGCATACACCAGTCCTCAATTCGCAGACCCTCCATGAGACAGATTGTGCAGCTTCTGAATGGCAATCTTAGCTGCTTTAAGAGCATGAAGAAGAGTCGGTTGCCATTTTTCCGAAAGCTCTTCCAGGAAGAGCTCCTTGATTCTGAATAG 1239 0.4487 MKEKADSPVGVLEDYFRSSESDTSSSKEPTVDSEAQDKSKFASKWRGFLQHLTTRSKKSSPTTMHPPLSVLKLSKRMSRSMRETIFPSSRLGADSSLHNSPWKIFTHREILLATSSFSQENLIGKGGYAEVYKGCLPDGQLVAIKKLTRGTQDEIISDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLEFSEKGSLASVLHGSKENLPWCIRYDIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDYGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKPLLKKNRIRELIDPSLGDAFDTRQMNLVLLVASLSIHQSSIRRPSMRQIVQLLNGNLSCFKSMKKSRLPFFRKLFQEELLDSE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2259 412 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Prci1g2259 412 MobiDBLite consensus disorder prediction 1 38 - -
Prci1g2259 412 SMART serkin_6 117 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2259 412 Gene3D Transferase(Phosphotransferase) domain 1 194 397 - -
Prci1g2259 412 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 88 191 - -
Prci1g2259 412 SUPERFAMILY Protein kinase-like (PK-like) 102 399 IPR011009 -
Prci1g2259 412 Gene3D Phosphorylase Kinase; domain 1 80 192 - -
Prci1g2259 412 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 194 396 - -
Prci1g2259 412 PANTHER OS08G0249100 PROTEIN 4 408 IPR046958 -
Prci1g2259 412 Pfam Protein kinase domain 118 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2259 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Prci1g2259 412 ProSiteProfiles Protein kinase domain profile. 117 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2259 Prci-Chr1 43175606 43178275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2259 104 378 Trihelix Transcription Factor Family AT1G68690 40.702 2.32e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci1g2259 Pkinase 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2259 - - gmx:100780587 660.218