Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2246 ATGAGGCCTGCATTCTTCTTACTGTGTTGCGTGGTCCTTTTTGCTTCTCTTAATGTTGGACAAGGTGGCAAACTCAGGAAGAACTTCTACCGAAGAACTTCTTGCCCTAAAGCTGAGGACATCATCAAAATAAGAACTACTCAGCTTGTCTCTTCTATTCCTGGTTTGCCAGCCCAGTTGCTGAGAATGCACTTTCATGACTGCTTTGTTAGGGGTTGTGATGCATCAGTCCTGCTGAACTCCACTGCTAATAATGCTGCAGAAAAGGACTCAATCCCAAACCTAACTTTGAAAGGCTTTGATGCCATCGATGATATAAAAGCCACCGTCGAGGCCCAATGCCCAGGTGTTGTTTCCTGCGCTGACATCCTCGCATTGGCCGCTAGGGACGCCGTTTCTATCCCTTTTAAGAAACCTCTATGGGAAGTGCTTACTGGTAGGAGAGATGGGAGGGTGTCGATAAGCCAAGAAGCATTGGTCAACATTCCGGCACCGTTCTTCAACTTCACTCAACTCAGAGCCAGCTTCGCCAGAAAAGGCCTGACGTTGCACGAGCTAGTGGTGTTGTCAGGCTCTCACACCATCGGAATAGCTCACTGCAACTCCTTCAGCACGAGGCTCTTCAACTTCACTGGAAAAGGCGACCAGGACCCTTCTCTGGACCCCACCTACGCCAAGTTCCTCAAGTCCAAATGCAAGAGCCTCAGTGACACTACCACCACCGTGGAAATGGACCCAAACAGCTCTACCTCGTTTGACTCTAGCTATTACTCCAACCTTGTTCAGAACAAGGGATTGTTCGAATCTGATGCTGCGCTTCTGACCGACAAGCAGGCCAGAAAGACTGTCCATGAACTGGTTGACCAAGAGGATTTCTTCACCGAGTTCGCGCAGGCCATGAAGAGGCTCGGAAACATTGAGGTCCTCGCCGGCACCAGTGGAGAAATTAGGAAGAAATGCTGGGTTGTTAACTCTGAAGCATATATGCTGCTGGATGGACCTATACCGAGGAATACAGCGGAATTCGTAAAGAACAAGGATAATGACGTTGTTTGGATGCCGACGAGATTAATTGCTCTTGCTTTGGACATATTTATACAAATTTTGTGTTATAGATCGTTATTTGGAGGGTTTTCCAATATGAGGTCTGCATTATTCCTCTTGCTAGGTTGTGTGGTAATCTTTGCTTCTCTTGTGGTTGGACAAGGAGACAGCCTCAGGAAGAACTTCTACCGAAGTTCTTGCCCTAAAGCAGAGGACATCATTAAAACGAGAACCTCTCAACTTGTCTCTGCTAATCCTGGTTTGCCCGCCCAGTTGCTGAGAATGCACTTTCATGACTGCTTTGTCAGGGGTTGTGATGCATCAGTCTTGTTGAACTCCACTGCTGATAATACTGCAGAAAGGGACTCCATCCCGAACCTAACTTTGAAAGGCTTTGATGCCATCGATAACTTAAAATCCACCGTCGAGGCTCAATGCCCAGGTGTTGTTTCCTGCGCTGACATTCTCGCTTTGGCCGCTAGGGACTCCGTTTCCATCCCATTTAAGAAACCTCTATGGGAAGTGCTTACTGGTAGGAGAGATGGGAGGGTGTCGATAAGCCAAGAAGCATTGGTCAACATTCCGGCACCGTTCTTCAACTTCACTCAACTCAGAGCCAGCTTCGCCAGAAAAGGCCTGACGTTGCACGAGCTGGTGGTGTTGTCGGGCTCTCACACCATCGGAATAGCTCACTGCAACTCCTTCAGCACGAGGCTCTTCAACTTCACCGGAAAAGGCGACCAGGACCCTTCTCTGGACCCTACCTACGCGGAGTTCCTCAAGTCCAAATGCAAGAGCATCAGTGACACTACCACCACCGTGGAAATGGACCCCAACAGCTCTACCTCGTTTGACTCTAGCTATTACTCCAACCTTGTTCAGAACAAGGGATTGTTCCAGTCTGATGCTGCGCTTCTGACCGACAAGCAGGCCAGGAAGACTGTCAATGAACTGATTGACCAAAGCGGTTTCTTCACCGAGTTCGCGCAGGCCATGAAGAGGCTCGGAAACATTGAGGTTCTCACCGGCACCAGTGGAGAAGTTAGGAAGAAATGTTGGGTTGTTAACTCTTAA 2118 0.4873 MRPAFFLLCCVVLFASLNVGQGGKLRKNFYRRTSCPKAEDIIKIRTTQLVSSIPGLPAQLLRMHFHDCFVRGCDASVLLNSTANNAAEKDSIPNLTLKGFDAIDDIKATVEAQCPGVVSCADILALAARDAVSIPFKKPLWEVLTGRRDGRVSISQEALVNIPAPFFNFTQLRASFARKGLTLHELVVLSGSHTIGIAHCNSFSTRLFNFTGKGDQDPSLDPTYAKFLKSKCKSLSDTTTTVEMDPNSSTSFDSSYYSNLVQNKGLFESDAALLTDKQARKTVHELVDQEDFFTEFAQAMKRLGNIEVLAGTSGEIRKKCWVVNSEAYMLLDGPIPRNTAEFVKNKDNDVVWMPTRLIALALDIFIQILCYRSLFGGFSNMRSALFLLLGCVVIFASLVVGQGDSLRKNFYRSSCPKAEDIIKTRTSQLVSANPGLPAQLLRMHFHDCFVRGCDASVLLNSTADNTAERDSIPNLTLKGFDAIDNLKSTVEAQCPGVVSCADILALAARDSVSIPFKKPLWEVLTGRRDGRVSISQEALVNIPAPFFNFTQLRASFARKGLTLHELVVLSGSHTIGIAHCNSFSTRLFNFTGKGDQDPSLDPTYAEFLKSKCKSISDTTTTVEMDPNSSTSFDSSYYSNLVQNKGLFQSDAALLTDKQARKTVNELIDQSGFFTEFAQAMKRLGNIEVLTGTSGEVRKKCWVVNS 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2246 705 Gene3D - 28 324 - -
Prci1g2246 705 PRINTS Plant peroxidase signature 623 638 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 415 434 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 439 459 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 564 576 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 497 507 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 517 532 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 678 691 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 478 491 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Plant peroxidase signature 639 656 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 FunFam Peroxidase 163 303 - -
Prci1g2246 705 ProSiteProfiles Plant heme peroxidase family profile. 405 704 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Prci1g2246 705 Gene3D - 409 704 - -
Prci1g2246 705 FunFam Peroxidase 28 166 - -
Prci1g2246 705 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 SUPERFAMILY Heme-dependent peroxidases 406 704 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 Gene3D Peroxidase, domain 2 163 303 - -
Prci1g2246 705 Gene3D Peroxidase, domain 2 543 683 - -
Prci1g2246 705 FunFam Peroxidase 409 546 - -
Prci1g2246 705 FunFam Peroxidase 543 683 - -
Prci1g2246 705 PANTHER PEROXIDASE 25-RELATED 393 692 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 SUPERFAMILY Heme-dependent peroxidases 30 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 CDD secretory_peroxidase 406 703 IPR033905 GO:0004601|GO:0042744
Prci1g2246 705 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 Pfam Peroxidase 53 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 Pfam Peroxidase 424 666 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g2246 705 ProSitePatterns Peroxidases proximal heme-ligand signature. 565 575 IPR019793 -
Prci1g2246 705 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2246 Prci-Chr1 43053951 43061119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2246 406 705 Peroxidase AT1G05260 56.106 1.38e-114 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2246 K00430 - pcin:129301853 1395.56