LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g2246	ATGAGGCCTGCATTCTTCTTACTGTGTTGCGTGGTCCTTTTTGCTTCTCTTAATGTTGGACAAGGTGGCAAACTCAGGAAGAACTTCTACCGAAGAACTTCTTGCCCTAAAGCTGAGGACATCATCAAAATAAGAACTACTCAGCTTGTCTCTTCTATTCCTGGTTTGCCAGCCCAGTTGCTGAGAATGCACTTTCATGACTGCTTTGTTAGGGGTTGTGATGCATCAGTCCTGCTGAACTCCACTGCTAATAATGCTGCAGAAAAGGACTCAATCCCAAACCTAACTTTGAAAGGCTTTGATGCCATCGATGATATAAAAGCCACCGTCGAGGCCCAATGCCCAGGTGTTGTTTCCTGCGCTGACATCCTCGCATTGGCCGCTAGGGACGCCGTTTCTATCCCTTTTAAGAAACCTCTATGGGAAGTGCTTACTGGTAGGAGAGATGGGAGGGTGTCGATAAGCCAAGAAGCATTGGTCAACATTCCGGCACCGTTCTTCAACTTCACTCAACTCAGAGCCAGCTTCGCCAGAAAAGGCCTGACGTTGCACGAGCTAGTGGTGTTGTCAGGCTCTCACACCATCGGAATAGCTCACTGCAACTCCTTCAGCACGAGGCTCTTCAACTTCACTGGAAAAGGCGACCAGGACCCTTCTCTGGACCCCACCTACGCCAAGTTCCTCAAGTCCAAATGCAAGAGCCTCAGTGACACTACCACCACCGTGGAAATGGACCCAAACAGCTCTACCTCGTTTGACTCTAGCTATTACTCCAACCTTGTTCAGAACAAGGGATTGTTCGAATCTGATGCTGCGCTTCTGACCGACAAGCAGGCCAGAAAGACTGTCCATGAACTGGTTGACCAAGAGGATTTCTTCACCGAGTTCGCGCAGGCCATGAAGAGGCTCGGAAACATTGAGGTCCTCGCCGGCACCAGTGGAGAAATTAGGAAGAAATGCTGGGTTGTTAACTCTGAAGCATATATGCTGCTGGATGGACCTATACCGAGGAATACAGCGGAATTCGTAAAGAACAAGGATAATGACGTTGTTTGGATGCCGACGAGATTAATTGCTCTTGCTTTGGACATATTTATACAAATTTTGTGTTATAGATCGTTATTTGGAGGGTTTTCCAATATGAGGTCTGCATTATTCCTCTTGCTAGGTTGTGTGGTAATCTTTGCTTCTCTTGTGGTTGGACAAGGAGACAGCCTCAGGAAGAACTTCTACCGAAGTTCTTGCCCTAAAGCAGAGGACATCATTAAAACGAGAACCTCTCAACTTGTCTCTGCTAATCCTGGTTTGCCCGCCCAGTTGCTGAGAATGCACTTTCATGACTGCTTTGTCAGGGGTTGTGATGCATCAGTCTTGTTGAACTCCACTGCTGATAATACTGCAGAAAGGGACTCCATCCCGAACCTAACTTTGAAAGGCTTTGATGCCATCGATAACTTAAAATCCACCGTCGAGGCTCAATGCCCAGGTGTTGTTTCCTGCGCTGACATTCTCGCTTTGGCCGCTAGGGACTCCGTTTCCATCCCATTTAAGAAACCTCTATGGGAAGTGCTTACTGGTAGGAGAGATGGGAGGGTGTCGATAAGCCAAGAAGCATTGGTCAACATTCCGGCACCGTTCTTCAACTTCACTCAACTCAGAGCCAGCTTCGCCAGAAAAGGCCTGACGTTGCACGAGCTGGTGGTGTTGTCGGGCTCTCACACCATCGGAATAGCTCACTGCAACTCCTTCAGCACGAGGCTCTTCAACTTCACCGGAAAAGGCGACCAGGACCCTTCTCTGGACCCTACCTACGCGGAGTTCCTCAAGTCCAAATGCAAGAGCATCAGTGACACTACCACCACCGTGGAAATGGACCCCAACAGCTCTACCTCGTTTGACTCTAGCTATTACTCCAACCTTGTTCAGAACAAGGGATTGTTCCAGTCTGATGCTGCGCTTCTGACCGACAAGCAGGCCAGGAAGACTGTCAATGAACTGATTGACCAAAGCGGTTTCTTCACCGAGTTCGCGCAGGCCATGAAGAGGCTCGGAAACATTGAGGTTCTCACCGGCACCAGTGGAGAAGTTAGGAAGAAATGTTGGGTTGTTAACTCTTAA	2118	0.4873	MRPAFFLLCCVVLFASLNVGQGGKLRKNFYRRTSCPKAEDIIKIRTTQLVSSIPGLPAQLLRMHFHDCFVRGCDASVLLNSTANNAAEKDSIPNLTLKGFDAIDDIKATVEAQCPGVVSCADILALAARDAVSIPFKKPLWEVLTGRRDGRVSISQEALVNIPAPFFNFTQLRASFARKGLTLHELVVLSGSHTIGIAHCNSFSTRLFNFTGKGDQDPSLDPTYAKFLKSKCKSLSDTTTTVEMDPNSSTSFDSSYYSNLVQNKGLFESDAALLTDKQARKTVHELVDQEDFFTEFAQAMKRLGNIEVLAGTSGEIRKKCWVVNSEAYMLLDGPIPRNTAEFVKNKDNDVVWMPTRLIALALDIFIQILCYRSLFGGFSNMRSALFLLLGCVVIFASLVVGQGDSLRKNFYRSSCPKAEDIIKTRTSQLVSANPGLPAQLLRMHFHDCFVRGCDASVLLNSTADNTAERDSIPNLTLKGFDAIDNLKSTVEAQCPGVVSCADILALAARDSVSIPFKKPLWEVLTGRRDGRVSISQEALVNIPAPFFNFTQLRASFARKGLTLHELVVLSGSHTIGIAHCNSFSTRLFNFTGKGDQDPSLDPTYAEFLKSKCKSISDTTTTVEMDPNSSTSFDSSYYSNLVQNKGLFQSDAALLTDKQARKTVNELIDQSGFFTEFAQAMKRLGNIEVLTGTSGEVRKKCWVVNS	705

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g2246	705	Gene3D	-	28	324	-	-
	Prci1g2246	705	PRINTS	Plant peroxidase signature	623	638	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	415	434	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	439	459	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	564	576	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	497	507	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	517	532	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	678	691	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	478	491	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Prci1g2246	705	PRINTS	Plant peroxidase signature	639	656	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 33 entries

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g2246	Prci-Chr1	43053951	43061119	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g2246	406	705	Peroxidase	AT1G05260	56.106	1.38e-114	346

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g2246	K00430		-	pcin:129301853	1395.56

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