Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2224 ATGAATTCAATGCTCACAAGGATGGGGGGATTTGGGTCCCCTGAAGATGCTTCAATAAATTCCATCACGCTATTTGTTGTTCTCCTTCTTTCTTGCGTTGTGATTGGACATCTCCTCGAAAAGAGCCGGTGGATGACTGAGTCAGTCATTGCATTGCTAATTGGTCTTTTAACGGGAACCATCATTCTATTAACAACTGGGTGGAAAAGTTCACACATTTTAGTATTTGATGAAGAACTTTTTTTCATATATCTTCTTCCTCCCATCATATTTAATGCAGGGTTCCAGGTGAAAAAGAAGCAGTTTTTTAAGAACTTCATGGCAATAGTTTTATATGGTGTTGTTGGGAGTATGATATCATTTGCCATTATATCACTAGGTTCAATTCAATTATTCAAAGGATTAGACATTGGTGTATTGGATCTGGGAGATTATTTTGGAATTTGTTTTTTCTTTCCTTTTGGAAGCAACATATTCACTCAAAAGCTAATAGATTGTGAGGTGCTTAATCAAGAAGAGACGCCTCTTCTGTACAGTTTAGTTTTTGGTGAAGGCGTTGTCAATGATGCAACATCAGTGGTTCTGTTCAATGCAATCCAAAAATTTGACCTCTCTCATATCACCTCAGCCAATATCTTGCAATTTGTTGGCAATTTCTTTTATTTATTCTTAACAAGCACTTTACTTGGAGTAGCGGTTGGCTTGTTCAGTGCGTACATTATAAAGAAGTTGTGTTTTGCCAGGCATTCCACTGATCGAGAAGTTGCTCTTATGTTCTTGATGGCTTATTTATCTTATATGTTGGCTGAACTTCTTGATTTAAGTGGGATCCTTACTGTGTTCTTTTGTGGGATTGCCATGTCGCACTATACCTGGCATAATGTTTCTGGGAGTTCTAAAGTTACGAGCAGGCATGCTTTTGCAGCTTTCTCATTTGTCTCTGAGATTTTTATCTTCTTATATGTTGGCATGGACGCCTTGGACATGGAGAAATGGAAATTTGCCAGCAAGAGTCCATGGACTTTAGTTGCGTCAAGTGGATTGCTGCTTTGCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTTCCCCTGTCATCTTTAGCCAATTTATTTAGGAAGTCTAACAATGATAAGATTACATTCAAGCAGCAGGTTGTGATATGGTGGGCTGGGCTTATGCGAGGTGCTGTATCTGTGGCACTTGCATACAATAAGTTTACAAGATCAGGACATACTCAGCTGCAAGGGAATGCCATCATGATTACCAGCACCATCATAGTCGTTCTCTTAACTAATGTGGTGGGAGGATTACTGACTAAGCCTCTGATAAGGTTATTGCTGAATCCCCATAAACATTCAGGCATCTCAGTGGATTCAGATTTATCACCCAGTAAGCGTTTGACTTTGCCGTTACTCTCCAACGAGCACGAATCGGAATCTAACGTAGACATCGGTAATCCCCTTGATTCCAATCGTACTGTTCATCACTATTGGCGAATCTTCGACGATTCAATTATGCGCCCTGTTTTTGGAGGGAGAGGATTTGCTCCTGTTGCTCCAGATTCCGAAAGAGACGTGATTCTGCGTTAA 1590 0.4025 MNSMLTRMGGFGSPEDASINSITLFVVLLLSCVVIGHLLEKSRWMTESVIALLIGLLTGTIILLTTGWKSSHILVFDEELFFIYLLPPIIFNAGFQVKKKQFFKNFMAIVLYGVVGSMISFAIISLGSIQLFKGLDIGVLDLGDYFGICFFFPFGSNIFTQKLIDCEVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITSANILQFVGNFFYLFLTSTLLGVAVGLFSAYIIKKLCFARHSTDREVALMFLMAYLSYMLAELLDLSGILTVFFCGIAMSHYTWHNVSGSSKVTSRHAFAAFSFVSEIFIFLYVGMDALDMEKWKFASKSPWTLVASSGLLLCLVLLGRAAFVFPLSSLANLFRKSNNDKITFKQQVVIWWAGLMRGAVSVALAYNKFTRSGHTQLQGNAIMITSTIIVVLLTNVVGGLLTKPLIRLLLNPHKHSGISVDSDLSPSKRLTLPLLSNEHESESNVDIGNPLDSNRTVHHYWRIFDDSIMRPVFGGRGFAPVAPDSERDVILR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2224 529 Gene3D - 19 448 IPR038770 -
Prci1g2224 529 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Prci1g2224 529 PANTHER SODIUM/HYDROGEN EXCHANGER 16 510 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Prci1g2224 529 PRINTS Na+/H+ exchanger signature 80 91 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci1g2224 529 PRINTS Na+/H+ exchanger signature 109 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci1g2224 529 PRINTS Na+/H+ exchanger signature 94 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci1g2224 529 Pfam Sodium/hydrogen exchanger family 26 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci1g2224 529 NCBIfam sodium/hydrogen exchanger 3 23 449 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2224 Prci-Chr1 42900242 42906718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2224 3 525 Antiporters AT3G05030 63.383 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2224 - K14724 cave:132168792 669.077