Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2222 ATGAATTCAATGCTCACAAGGATGGGGGGATTTGGGTCCCCTGAAGATGCTTCAATAAATTCCATCACGCTATTTGTTGTTCTCCTTCTTTCTTGCGTTGTGATTGGACATCTCCTCGAAAAGAGCCGGTGGATGACTGAGTCAGTCATTGCATTGCTAATTGGTCTTTTAACGGGAACCATCATTCTATTAACAACTGGGTGGAAAAGTTCACACATTTTAGTATTTGATGAAGAACTTTTTTTCATATATCTTCTTCCTCCCATCATATTTAATGCAGGGTTCCAGGTGAAAAAGAAGCAGTTTTTTAAGAACTTCATGGCAATAGTTTTATATGGTGTTGTTGGGAGTATGATATCATTTGCCATTATATCACTAGGTTCAATTCAATTATTCAAAGGATTAGACATTGGTGTATTGGATCTGGGAGATTATTTTGCAGGAATTTGTTTTTTCTTTCCTTTTGGAAGCAACATATTCACTCAAAAGCTAATAGATTGTGAGGTGCTTAATCAAGAAGAGACGCCTCTTCTGTACAGTTTAGTTTTTGGTGAAGGCGTTGTCAATGATGCAACATCAGTGGTTCTGTTCAATGCAATCCAAAAATTTGACCTCTCTCATATCACCTCAGCCAATATCTTGCAATTTGTTGGCAATTTCTTTTATTTATTCTTAACAAGCACTTTACTTGGAGTAGCGGTTGGCTTGTTCAGTGCGTACATTATAAAGAAGTTGTGTTTTGCCAGGCATTCCACTGATCGAGAAGTTGCTCTTATGTTCTTGATGGCTTATTTATCTTATATGTTGGCTGAACTTCTTGATTTAAGTGGGATCCTTACTGTGTTCTTTTGTGGGATTGCCATGTCGCACTATACCTGGCATAATGTTTCTGGGAGTTCTAAAGTTACGAGCAGGCATGCTTTTGCAGCTTTCTCATTTGTCTCTGAGATTTTTATCTTCTTATATGTTGGCATGGACGCCTTGGACATGGAGAAATGGAAATTTGCCAGCAAGAGTCCATGGACTTTAGTTGCGTCAAGTGGATTGCTGCTTTGCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTTCCCCTGTCATCTTTAGCCAATTTATTTAGGAAGTCTAACAATGATAAGATTACATTCAAGCAGCAGGTTGTGATATGGTGGGCTGGGCTTATGCGAGGTGCTGTATCTGTGGCACTTGCATACAATAAGTTTACAAGATCAGGACATACTCAGCTGCAAGGGAATGCCATCATGATTACCAGCACCATCATAGTCGTTCTCTTAACTAATGTGGTGGGAGGATTACTGACTAAGCCTCTGATAAGGTTATTGCTGAATCCCCATAAACATTCAGGCATCTCAGTGGATTCAGATTTATCACCCAGTAAGCGTTTGACTTTGCCGTTACTCTCCAACGAGCACGAATCGGAATCTAACGTAGACATCGGGAACATCATAGCATGTATCTGTCATCCCCCGAAGGGAGCAAAAAGACGACCTAATGCAAGTAGTCTGTCTCCAATGAGTGAAGAGTCTGCCACATCTGAGGATGGTTCGATTTAA 1572 0.4027 MNSMLTRMGGFGSPEDASINSITLFVVLLLSCVVIGHLLEKSRWMTESVIALLIGLLTGTIILLTTGWKSSHILVFDEELFFIYLLPPIIFNAGFQVKKKQFFKNFMAIVLYGVVGSMISFAIISLGSIQLFKGLDIGVLDLGDYFAGICFFFPFGSNIFTQKLIDCEVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITSANILQFVGNFFYLFLTSTLLGVAVGLFSAYIIKKLCFARHSTDREVALMFLMAYLSYMLAELLDLSGILTVFFCGIAMSHYTWHNVSGSSKVTSRHAFAAFSFVSEIFIFLYVGMDALDMEKWKFASKSPWTLVASSGLLLCLVLLGRAAFVFPLSSLANLFRKSNNDKITFKQQVVIWWAGLMRGAVSVALAYNKFTRSGHTQLQGNAIMITSTIIVVLLTNVVGGLLTKPLIRLLLNPHKHSGISVDSDLSPSKRLTLPLLSNEHESESNVDIGNIIACICHPPKGAKRRPNASSLSPMSEESATSEDGSI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2222 523 Pfam Sodium/hydrogen exchanger family 26 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci1g2222 523 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Prci1g2222 523 MobiDBLite consensus disorder prediction 498 523 - -
Prci1g2222 523 Gene3D - 19 449 IPR038770 -
Prci1g2222 523 PRINTS Na+/H+ exchanger signature 94 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci1g2222 523 PRINTS Na+/H+ exchanger signature 80 91 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci1g2222 523 PRINTS Na+/H+ exchanger signature 109 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci1g2222 523 MobiDBLite consensus disorder prediction 505 523 - -
Prci1g2222 523 PANTHER SODIUM/HYDROGEN EXCHANGER 16 447 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2222 Prci-Chr1 42900242 42907130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2222 3 477 Antiporters AT3G05030 65.900 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2222 - K14724 cave:132168792 628.632