Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2190 ATGGCGGGAAGGAGGAAACCTCTGGTACTCGCTTCCACCAAGTTGCTAATTAATTCTGTGCTCAGCTCATCACAAGGCGCGGAAGCAAGCCCTGGAGCCGGAGACAAGCTCTTCGATGACGACTCTCTCAGGAATTTGCAGTTACCCGTGGGCATTCTCCGACTCTCGGAGGATGGAAACGAGAGAACAGAACCTCAATCGGCTGCTCTTGACGATTCTGCGTTGGTCGGCCTATCAACTTCGCTTTTGAGAAGGCTTACTATTACTGCGGGTTCACTGGTGCTTGTCAAGAATGTTGAGATGAACATCCAGAGAATTGCTCAGGCAGTTGCCTTAGATCCTCCTGGCAGCAATGACTGCACATCTGGTGTTAAATTGCCCTCTCCCCCTATAATGCTTGCATTTCCTTCTTGTGCTTTCCCTCATGGTGACACGTTAGATCATGAAGCTGCTTATATATCTCCTCTCTTAGCTTTTAACCTCGATTTGCACATAACATGCTTAGAATCCATTCTATGCCAAGGGGAAGAGGCATTAGCATCCTATTTCAACCTGAAAGTGGATGGTGAGGCTACTGCAAAAAGCACGGAGACTTCTGTCATCAACATAGAATTGGTACCTTTGGTTCAAGCTCCTAGGTATGCATCACATTTAAGGGTTTCTTTTGTGAAGATACCACAATGTGGTACCCTTGAAACAATAAGGGGAAGTTCACCTATTGAATCAGAAGACCGCCAGAATATGATTGATTTGGCATTGCAAAACTATTTTCAAGTGGATAGATATTTGACAAAAGGAGATATTTTTAGCATCAGCATAAATTGGAACTGCAATTCCGTAGCATGTATTCCATGCAACCGAGAATCACAAAAGAAAAATGGAAATCTCATCTTTTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAATTCTTCGTGTCAATCGATCGTCAACAGCTTTGGTGCTTGGAGGGAGCTTCTCTTCTGCTCTTCCACCAGATTTGTTAATTGCTGGACCAGAAGAGCCTGTGCCTTTACAACAGGACGCAGTAAAAATTTTGGCTTCAGTGCTTACACCAGCTTGCTGTCCATCAGCACTTTCTTTAAAATTCAGAGTTTCAGTTCTATTGTATGGATTGGAAGGTTGTGGGAAGCGGACTGTTGTTAGATATGTTGCTCATCGATTGGGCCTGCATGTGGTGGAATATAACTGTCATGATTTAACATTGTCAGAGAGGAACACATCTGCTGCGCTAGTTCAAGCTTTCAAGACAGCTCGAAGATACTCACCAACTATACTTCTTCTGCGTCATTTTGAAGTTTTTCGAGACATGCAAGCTAATGAGGGTCCAGTAAATGATCAAAGAGGAAATACATTTGAAATTGCATCAATTATTAGGAAATTCACTGAGCCAACTCCTAAAGATGGTGGCATATACTCCCATGAGAAACCAAATGGTGAATTTGTTGAGAAGAGTGCTGAAAAGACAAGTGGGCATCAGATCCTGTTGATTGCAGCTGCTGTTAGTTCAGAAGGTCTGCCTTCAACTATCAGACGCTGCTTCAGCCATGAAATAAAAATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATCCCAGTCACTGCAAAGTGTCTCTGAATTCCTCTCTAATACTGATGCTGACAGTTTTGTAAAAGAAATAGTTGGGCAGACATCTGGTTTTATGCCCCGGGACATGTGTGCTTTGATTGCTGATGTTGGTGCCAACCTATTTCCCAGGAGTTCCGAAGCTGTAGACAAAGCCAGGCCTAAGGATATTGATGGTTCTTTTAGTTCTGAAGTGATGCCGGAGAGCAACCACCGGAAAGTTGCGCCAGAGGTTCATGGCAAAGAACACTTGGCAAAAGCTTTGGATCGATCAAAGAAAAGAAATGCAGTTGCATTGGGTGCTCCAAAGGTTCCTGATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTAAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCCTGCATAAGGATCTGTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTCTGTATGGTCCTCCTGGAACTGGCAAAACATTATTAGCCAAAGCTGTTGCTACCGAATGTTCCTTAAATTTTCTTAGTGTGAAAGGGCCTGAACTGATTAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCCAGATCATCACGACCATGTGTTATCTTCTTTGATGAGCTTGATTCTCTTGCTCCTGCTCGAGGTGCTTCTGGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTGGCAGAGATTGATGGCCTGAATGATTCTGCACAGGATCTCTTTATTATAGGTGCAAGTAACAGGCCAGACTTGATAGACCCTGCACTTTTACGCCCTGGCAGATTTGATAAACTGCTGTATGTTGGAGTTAATTCTGATGCATCTTATAGAGAGCGGGTTCTTAAAGCACTTACCCGAAAGTTTAAATTGTCAGAAGATGTGTCACTTTACTCAATAGCTAAAAAGTGTCCGCCAAACTTTACTGGTGCAGACATGTACGCCTTGTGTGCAGATGCATGGTTTCAGGCTGCAAAACGCAAGATCCAGAATCTTCCTGTAAGGATGACGAAGCAGATTCTGTTGTTGTTGAATACGATGATTTTGTCCAGGTCTTGGTGGAGCTGA 2727 0.4371 MAGRRKPLVLASTKLLINSVLSSSQGAEASPGAGDKLFDDDSLRNLQLPVGILRLSEDGNERTEPQSAALDDSALVGLSTSLLRRLTITAGSLVLVKNVEMNIQRIAQAVALDPPGSNDCTSGVKLPSPPIMLAFPSCAFPHGDTLDHEAAYISPLLAFNLDLHITCLESILCQGEEALASYFNLKVDGEATAKSTETSVINIELVPLVQAPRYASHLRVSFVKIPQCGTLETIRGSSPIESEDRQNMIDLALQNYFQVDRYLTKGDIFSISINWNCNSVACIPCNRESQKKNGNLIFFKVIAMEPSDEPILRVNRSSTALVLGGSFSSALPPDLLIAGPEEPVPLQQDAVKILASVLTPACCPSALSLKFRVSVLLYGLEGCGKRTVVRYVAHRLGLHVVEYNCHDLTLSERNTSAALVQAFKTARRYSPTILLLRHFEVFRDMQANEGPVNDQRGNTFEIASIIRKFTEPTPKDGGIYSHEKPNGEFVEKSAEKTSGHQILLIAAAVSSEGLPSTIRRCFSHEIKMGPLTEEQRAEMLSQSLQSVSEFLSNTDADSFVKEIVGQTSGFMPRDMCALIADVGANLFPRSSEAVDKARPKDIDGSFSSEVMPESNHRKVAPEVHGKEHLAKALDRSKKRNAVALGAPKVPDVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSAQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLSEDVSLYSIAKKCPPNFTGADMYALCADAWFQAAKRKIQNLPVRMTKQILLLLNTMILSRSWWS 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2190 908 SMART AAA_5 687 827 IPR003593 GO:0016887
Prci1g2190 908 SMART AAA_5 371 532 IPR003593 GO:0016887
Prci1g2190 908 FunFam Peroxisome biogenesis protein 6 344 529 - -
Prci1g2190 908 FunFam Peroxisomal biogenesis factor 6 649 838 - -
Prci1g2190 908 Gene3D - 649 824 IPR027417 -
Prci1g2190 908 PANTHER AAA-FAMILY ATPASE 68 882 - -
Prci1g2190 908 CDD RecA-like_PEX6_r2 663 822 IPR047533 -
Prci1g2190 908 Pfam ATPase family associated with various cellular activities (AAA) 691 823 IPR003959 GO:0005524|GO:0016887
Prci1g2190 908 Pfam ATPase family associated with various cellular activities (AAA) 375 528 IPR003959 GO:0005524|GO:0016887
Prci1g2190 908 Gene3D - 343 549 IPR027417 -
Prci1g2190 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 595 IPR027417 -
Prci1g2190 908 MobiDBLite consensus disorder prediction 605 626 - -
Prci1g2190 908 ProSitePatterns AAA-protein family signature. 794 812 IPR003960 GO:0005524|GO:0016887
Prci1g2190 908 Gene3D - 825 886 - -
Prci1g2190 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 650 891 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2190 Prci-Chr1 42686795 42693751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2190 648 889 Calmodulin-binding Proteins AT3G56690 48.560 2.47e-63 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2190 K13339 - qsa:O6P43_010733 1232.24