Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2189 ATGGCGGGAAGGAGGAAACCTCTGGTACTCGCTTCCACCAAGTTGCTAATTAATTCTGTGCTCAGCTCATCACAAGGCGCGGAAGCAAGCCCTGGAGCCGGAGACAAGCTCTTCGATGACGACTCTCTCAGGAATTTGCAGTTACCCGTGGGCATTCTCCGACTCTCGGAGGATGGAAACGAGAGAACAGAACCTCAATCGGCTGCTCTTGACGATTCTGCGTTGGTCGGCCTATCAACTTCGCTTTTGAGAAGGCTTACTATTACTGCGGGTTCACTGGTGCTTGTCAAGAATGTTGAGATGAACATCCAGAGAATTGCTCAGGCAGTTGCCTTAGATCCTCCTGGCAGCAATGACTGCACATCTGGTGTTAAATTGCCCTCTCCCCCTATAATGCTTGCATTTCCTTCTTGTGCTTTCCCTCATGGTGACACGTTAGATCATGAAGCTGCTTATATATCTCCTCTCTTAGCTTTTAACCTCGATTTGCACATAACATGCTTAGAATCCATTCTATGCCAAGGGGAAGAGGCATTAGCATCCTATTTCAACCTGAAAGTGGATGGTGAGGCTACTGCAAAAAGCACGGAGACTTCTGTCATCAACATAGAATTGGTACCTTTGGTTCAAGCTCCTAGGTATGCATCACATTTAAGGGTTTCTTTTGTGAAGATACCACAATGTGGTACCCTTGAAACAATAAGGGGAAGTTCACCTATTGAATCAGAAGACCGCCAGAATATGATTGATTTGGCATTGCAAAACTATTTTCAAGTGGATAGATATTTGACAAAAGGAGATATTTTTAGCATCAGCATAAATTGGAACTGCAATTCCGTAGCATGTATTCCATGCAACCGAGAATCACAAAAGAAAAATGGAAATCTCATCTTTTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAATTCTTCGTGTCAATCGATCGTCAACAGCTTTGGTGCTTGGAGGGAGCTTCTCTTCTGCTCTTCCACCAGATTTGTTAATTGCTGGACCAGAAGAGCCTGTGCCTTTACAACAGGACGCAGTAAAAATTTTGGCTTCAGTGCTTACACCAGCTTGCTGTCCATCAGCACTTTCTTTAAAATTCAGAGTTTCAGTTCTATTGTATGGATTGGAAGGTTGTGGGAAGCGGACTGTTGTTAGATATGTTGCTCATCGATTGGGCCTGCATGTGGTGGAATATAACTGTCATGATTTAACATTGTCAGAGAGGAACACATCTGCTGCGCTAGTTCAAGCTTTCAAGACAGCTCGAAGATACTCACCAACTATACTTCTTCTGCGTCATTTTGAAGTTTTTCGAGACATGCAAGCTAATGAGGGTCCAGTAAATGATCAAAGAGGAAATACATTTGAAATTGCATCAATTATTAGGAAATTCACTGAGCCAACTCCTAAAGATGGTGGCATATACTCCCATGAGAAACCAAATGGTGAATTTGTTGAGAAGAGTGCTGAAAAGACAAGTGGGCATCAGATCCTGTTGATTGCAGCTGCTGTTAGTTCAGAAGGTCTGCCTTCAACTATCAGACGCTGCTTCAGCCATGAAATAAAAATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATCCCAGTCACTGCAAAGTGTCTCTGAATTCCTCTCTAATACTGATGCTGACAGTTTTGTAAAAGAAATAGTTGGGCAGACATCTGGTTTTATGCCCCGGGACATGTGTGCTTTGATTGCTGATGTTGGTGCCAACCTATTTCCCAGGAGTTCCGAAGCTGTAGACAAAGCCAGGCCTAAGGATATTGATGGTTCTTTTAGTTCTGAAGTGATGCCGGAGAGCAACCACCGGAAAGTTGCGCCAGAGGTTCATGGCAAAGAACACTTGGCAAAAGCTTTGGATCGATCAAAGAAAAGAAATGCAGTTGCATTGGGTGCTCCAAAGGTTCCTGATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTAAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCCTGCATAAGGATCTGTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTCTGTATGGTCCTCCTGGAACTGGCAAAACATTATTAGCCAAAGCTGTTGCTACCGAATGTTCCTTAAATTTTCTTAGTGTGAAAGGGCCTGAACTGATTAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCCAGATCATCACGACCATGTGTTATCTTCTTTGATGAGCTTGATTCTCTTGCTCCTGCTCGAGGTGCTTCTGGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTGGCAGAGATTGATGGCCTGAATGATTCTGCACAGGATCTCTTTATTATAGGTGCAAGTAACAGGCCAGACTTGATAGACCCTGCACTTTTACGCCCTGGCAGATTTGATAAACTGCTGTATGTTGGAGTTAATTCTGATGCATCTTATAGAGAGCGACATGTACGCCTTGTGTGCAGATGCATGGTTTCAGGCTGCAAAACGCAAGGTTTTAAGTGCAGATCCAGAATCTTCCTGTAA 2580 0.4384 MAGRRKPLVLASTKLLINSVLSSSQGAEASPGAGDKLFDDDSLRNLQLPVGILRLSEDGNERTEPQSAALDDSALVGLSTSLLRRLTITAGSLVLVKNVEMNIQRIAQAVALDPPGSNDCTSGVKLPSPPIMLAFPSCAFPHGDTLDHEAAYISPLLAFNLDLHITCLESILCQGEEALASYFNLKVDGEATAKSTETSVINIELVPLVQAPRYASHLRVSFVKIPQCGTLETIRGSSPIESEDRQNMIDLALQNYFQVDRYLTKGDIFSISINWNCNSVACIPCNRESQKKNGNLIFFKVIAMEPSDEPILRVNRSSTALVLGGSFSSALPPDLLIAGPEEPVPLQQDAVKILASVLTPACCPSALSLKFRVSVLLYGLEGCGKRTVVRYVAHRLGLHVVEYNCHDLTLSERNTSAALVQAFKTARRYSPTILLLRHFEVFRDMQANEGPVNDQRGNTFEIASIIRKFTEPTPKDGGIYSHEKPNGEFVEKSAEKTSGHQILLIAAAVSSEGLPSTIRRCFSHEIKMGPLTEEQRAEMLSQSLQSVSEFLSNTDADSFVKEIVGQTSGFMPRDMCALIADVGANLFPRSSEAVDKARPKDIDGSFSSEVMPESNHRKVAPEVHGKEHLAKALDRSKKRNAVALGAPKVPDVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSAQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERHVRLVCRCMVSGCKTQGFKCRSRIFL 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2189 859 SMART AAA_5 687 827 IPR003593 GO:0016887
Prci1g2189 859 SMART AAA_5 371 532 IPR003593 GO:0016887
Prci1g2189 859 Gene3D - 343 549 IPR027417 -
Prci1g2189 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 650 832 IPR027417 -
Prci1g2189 859 PANTHER AAA-FAMILY ATPASE 68 835 - -
Prci1g2189 859 FunFam Peroxisome biogenesis protein 6 344 529 - -
Prci1g2189 859 Gene3D - 825 840 - -
Prci1g2189 859 FunFam Peroxisomal biogenesis factor 6 649 837 - -
Prci1g2189 859 CDD RecA-like_PEX6_r2 663 822 IPR047533 -
Prci1g2189 859 Gene3D - 649 824 IPR027417 -
Prci1g2189 859 MobiDBLite consensus disorder prediction 605 626 - -
Prci1g2189 859 ProSitePatterns AAA-protein family signature. 794 812 IPR003960 GO:0005524|GO:0016887
Prci1g2189 859 Pfam ATPase family associated with various cellular activities (AAA) 691 823 IPR003959 GO:0005524|GO:0016887
Prci1g2189 859 Pfam ATPase family associated with various cellular activities (AAA) 375 528 IPR003959 GO:0005524|GO:0016887
Prci1g2189 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 595 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2189 Prci-Chr1 42686795 42693752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2189 657 842 Calmodulin-binding Proteins AT3G56690 40.860 1.32e-34 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2189 K13339 - qsa:O6P43_010733 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3099 3 42251657 42252466 Prci1g2189 1 42686795 42693752 CCT