Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2159 ATGATGGGCAAAGCTTCACTAGATCTCAGGAATTGCCTTCTGCTGCTATTGTGCAGCTCCATGGGCTTATGGGGTTTTGCTGAGTCGGAGGCTGAAGATGACGTGAAATGCCTCAAGGGCATCCAAGATTCGTTCCGTGGTCCGCTTTCAGCGTGGCAATTCAACAACAACACCCCCGGATTCATTTGCCGATTCACCGGCGTTACGTGCTGGAACGAGCAGCAGAATCGCATCATCAATCTGGTTCTCAATGGTATGGAGCTCTCCGGTCGCGTGCCGGAGTCCTTGAAGTACTGTGGTAATCTGCAACGACTGGATCTTGGGTCCAACGACCTTTATGGTAACATCCCCTATGAGATTTGTGTTTGGATGAAGTATTTAGTGAGCATTGACTTGTCAGGAAATCGTCTTTCTGGACCTATTCCCCCTTCTCTCGGGAATTGCTCGTATTTGAATGAGTTAAGCCTTTCCGGTAATCAGCTTTCAGGTGTCATCCCCGTCGAAATTGGGAGCTTGAGTAGGCTTAGCAAGTTTACTGTTGCTAATAATCATCTTCAGGGTGCGATTCCTTCGTCTTTAAGTCGGTTTGAGAAGGAGGACTTTGAGGGGAATAGTGGGCTTTGTGGGGATCCTCTTGGATCTAAGTGTGGAGGGTTGAGTAAGAAGAATCTTGCCATCATCATAGCTGCTGGGGTGTTTGGTGCAGCTGCTTCTTTGTTGTTGGCCTTTGGGCTCTGGTGGTGGTACCATTTGAGATTGAGTAAGAAGGGGTTTGGAGACGGAGCAAGTGATAATTGGGCTGTGAAATTGAGGGGTTACAAGCTTGTGCAAGTCACTCTATTCCAAAAACCTCTTGTGAAGGTTAAACTAGGCGATTTGATGGCGGCTACCAATAATTTCAATGCAGAAAACATTCTTATTTCAACGAGAACAGGAACTACGTACAAAGCAGATCTTCCTGATGGGTCAACCCTTGCAGTCAAACGGCTCAACACGTGTAAAATCTTGGAGAAGCTGTTTCGTGCGGAGATGAATAGGCTAGGGCTACTCAGGCACCCGAATTTGGCACCGCTTTTGGGATTCTGCGTAGTGGAAGAGGAAAAGCTTCTGGTTTACAAGTACATGTCAAATGGAACTCTCTACTCCTTGTTGCACAAAAACGGCAGTGCATTGGACTGGCCCATGAGATTCAGAATAGGCTTGGGGGCAGCTAGGGGTCTTGCCTGGCTGCATCATGGCTGCCATCCTCCTATTATACACCAAAATATCTGTTCCAATGTGATTCTTGTTGATGAAGATTTTGATGCTCGTTTGATGGACTCTGGACTTGCCCGGCTTATGATATCTGAAGCTGAAGGGAGTAGTTTTGTGAGTGGAGACGTGGGAGAACTTGGCTATATAGCTCCAGAATATCCAAGCACCATGGTGCCTTCACCAAAAGGAGATGTGTATGGATTTGGGGTTGTGCTTTTGGAGCTGGTTACTGGGCAGAAGCCTCTTGAAGTCAGCATTAGAGAGGAAGAAGTTAAGGGTAATTTAGTGAATTGGGTGAATATGCTTTCTAATTCAGGTCGCATAAAAGATTGCATTGACCAGGCCATAAGCGGAAAGGGACATGATGAGGAGATTTTGCAGTTCCTGAGGATTGCATGTAACTGTGTGGTTTCTCATCCTAAGGATAGGTTGTCTATGTTCCAGGTTTATCATTCGTTAAAGAGTCTGTCTAGGGACGAAAGTTTTTCGGAGCATGATGATGAATTTCCACTGATCTTCGGGAAACCGAATGATGAACAAACCTAG 1800 0.4622 MMGKASLDLRNCLLLLLCSSMGLWGFAESEAEDDVKCLKGIQDSFRGPLSAWQFNNNTPGFICRFTGVTCWNEQQNRIINLVLNGMELSGRVPESLKYCGNLQRLDLGSNDLYGNIPYEICVWMKYLVSIDLSGNRLSGPIPPSLGNCSYLNELSLSGNQLSGVIPVEIGSLSRLSKFTVANNHLQGAIPSSLSRFEKEDFEGNSGLCGDPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSKKGFGDGASDNWAVKLRGYKLVQVTLFQKPLVKVKLGDLMAATNNFNAENILISTRTGTTYKADLPDGSTLAVKRLNTCKILEKLFRAEMNRLGLLRHPNLAPLLGFCVVEEEKLLVYKYMSNGTLYSLLHKNGSALDWPMRFRIGLGAARGLAWLHHGCHPPIIHQNICSNVILVDEDFDARLMDSGLARLMISEAEGSSFVSGDVGELGYIAPEYPSTMVPSPKGDVYGFGVVLLELVTGQKPLEVSIREEEVKGNLVNWVNMLSNSGRIKDCIDQAISGKGHDEEILQFLRIACNCVVSHPKDRLSMFQVYHSLKSLSRDESFSEHDDEFPLIFGKPNDEQT 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2159 599 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Prci1g2159 599 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 77 573 - -
Prci1g2159 599 FunFam Nuclear pore complex protein NUP107 28 191 - -
Prci1g2159 599 CDD STKc_IRAK 308 574 - -
Prci1g2159 599 Pfam Protein tyrosine and serine/threonine kinase 321 516 IPR001245 GO:0004672|GO:0006468
Prci1g2159 599 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 261 374 - -
Prci1g2159 599 Gene3D Phosphorylase Kinase; domain 1 261 374 - -
Prci1g2159 599 SUPERFAMILY L domain-like 32 204 - -
Prci1g2159 599 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 375 593 - -
Prci1g2159 599 SUPERFAMILY Protein kinase-like (PK-like) 278 571 IPR011009 -
Prci1g2159 599 Gene3D Ribonuclease Inhibitor 32 218 IPR032675 -
Prci1g2159 599 ProSiteProfiles Protein kinase domain profile. 300 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2159 599 Gene3D Transferase(Phosphotransferase) domain 1 375 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2159 Prci-Chr1 42412723 42415091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2159 12 599 Receptor kinase-like Gene Family AT3G28450 61.436 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Prci1g2159 PK_Tyr_Ser-Thr 4.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2159 - - qsa:O6P43_009034 869.381