Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2150 ATGGACAAGCCTCCACCCGAGAATGCTGACCACAATGATGCTGAATCTGCTATTGCTGGCAGCCTCCGGGACCTCAATGTTAGTGGCAGTGCGAGTATTAGTATGTGTAGTAGTTGTAGCAACGTTGAGACTCAGAGGAGCACTGAATCTATGACGGATTGCGAAGCCAGCGAGGGTAGTTTTAGGAGCACTAGCCCTTCGAAGCCTCACAAGGGCAGCGACATAAGGTGGGACGCGATACAATGTGTGAAGGGGAAAGATGGGGAATTGGGGTTGGGGCATTTCAGACTGTTGAAAAAGCTGGGTTTTGGGGATATTGGGAGTGTGTATTTGGCTGAGCTCAGAGGGATGGGTTGTTTGTTTGCGATGAAGGTTATGGATAAGGGCACGTTGGCTGGAAGGAAGAAATTGGCCAGAGCTCAGACTGAGAGAGACATTTTGGGTTTATTGGACCATCCTTTCCTTCCCTCCCTTTATTCTCATTTTGAGACTGAGAAGTTCTCTTGCTTGCTCATGGAGTTTTGCAGTGGTGGGGATCTCCATACCCTCCGCCAGCGGCAGCAAGGCAAGCATTTCACAGAGCAAGCTGCCAGATTTTACGCTTCTGAAGTGCTTCTCGCTCTGGAGTATCTACACATGATGGGAGTGGTGTACAGAGACTTGAAGCCAGAAAATGTACTGGTAAGAGAAGATGGGCATATCATGCTCTCTGATTTTGACTTGTCATTAAGATGCTGTGTAAGTCCCACACTTGTTCAGTCCAGCAAAGAACCATCTTGTCAGATATCCTCCTACTGCATCCAGCCATCTTCATGCATCGATCCACCCTGCAAATTACCCGTTTGCGTGGAGCCTTCGTGCTTGCAGCCATCTTGCTTCAAGCCGCGTTTCTTCAACTCAAAAAAGACCAAACGAAAGAGTGAAAAGCACAGTTCAGCGAATTCAGACTCATTCCCAATGCTAATTGCGGAACCAACTAATGCTCGCTCTATGTCATTTGTTGGGACTCATGAATATCTAGCTCCTGAAATTATAAGAGGTGATGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTATTTTCCTGTATGAATTGTTGTTTGGGAGGACCCCATTTAAAGGCAATGGGAATCGAGAAACGTTGTTCAATGTTGTGGGTCAGAGTCTTAAGTTTCCTGAGGGATCAAGCATCAGTTTTGCTGCGAAGGATTTGATAAGAGGATTGCTCGTGAAGGACCCGCAGAAGAGACTTGGATTCAAGAGAGGAGCCACGGAGATCAAACAACATCCTTTCTTTGAAGGTATTAATTGGGCTCTCATTCGCAGCATCCATCCCCCTGAGATCCCAAAACCACTCGATCTTTCATTTATGAATCAGACGTCCAAGTCACCTTCATTGCCTCCTAATGAAAAAGGTGCTGCTGCTACTGATTCAGACAGGTCCTCCTCCGGTCCATACTTGGATTTTGAATTCTTTTAA 1482 0.4663 MDKPPPENADHNDAESAIAGSLRDLNVSGSASISMCSSCSNVETQRSTESMTDCEASEGSFRSTSPSKPHKGSDIRWDAIQCVKGKDGELGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKGTLAGRKKLARAQTERDILGLLDHPFLPSLYSHFETEKFSCLLMEFCSGGDLHTLRQRQQGKHFTEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSSKEPSCQISSYCIQPSSCIDPPCKLPVCVEPSCLQPSCFKPRFFNSKKTKRKSEKHSSANSDSFPMLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLFGRTPFKGNGNRETLFNVVGQSLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFEGINWALIRSIHPPEIPKPLDLSFMNQTSKSPSLPPNEKGAAATDSDRSSSGPYLDFEFF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2150 493 SMART serkin_6 95 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2150 493 FunFam serine/threonine-protein kinase D6PK-like 328 451 - -
Prci1g2150 493 MobiDBLite consensus disorder prediction 459 493 - -
Prci1g2150 493 FunFam serine/threonine-protein kinase D6PK-like 179 246 - -
Prci1g2150 493 Pfam Protein kinase domain 330 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2150 493 Pfam Protein kinase domain 96 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2150 493 FunFam Serine/threonine-protein kinase D6PK-like 93 178 - -
Prci1g2150 493 PANTHER FLIPPASE KINASE 1-RELATED 39 456 - -
Prci1g2150 493 ProSiteProfiles Protein kinase domain profile. 95 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2150 493 MobiDBLite consensus disorder prediction 50 72 - -
Prci1g2150 493 Gene3D Phosphorylase Kinase; domain 1 94 174 - -
Prci1g2150 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Prci1g2150 493 CDD STKc_phototropin_like 94 454 - -
Prci1g2150 493 Gene3D Transferase(Phosphotransferase) domain 1 175 244 - -
Prci1g2150 493 SUPERFAMILY Protein kinase-like (PK-like) 70 464 IPR011009 -
Prci1g2150 493 Gene3D Transferase(Phosphotransferase) domain 1 327 451 - -
Prci1g2150 493 MobiDBLite consensus disorder prediction 50 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2150 Prci-Chr1 42349010 42351304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2150 1 493 AGC Kinase Gene Family AT5G40030 71.094 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci1g2150 Pkinase 6.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2150 K08286 - zju:125421897 796.193