Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2131 ATGGGATTTGGGAATAATGCAATTCAGGCTGGTAGTTTGGACGTGGGCAAGTCGAATGGAAGGAAGAAGAAAGATGGCGCAGAGAAGCAGAGTGGATGTTGGGCTAAATTCAGTTGCATCGGAAGCTGCATACCTTCTAGATCAAAGATTGATAACTCCTTAAGTGGTGGTCCAAGCGCCCATAATGTGGAAAACAGATGTACAAATGAAAATACCAAAGATCGAACAGTTGCTCCTCCAGAGTCATCCACTACTACTACTAGTAATGCGGGAAGCATACCCTCAACTCCAATATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTCACATTCAATGAACTTAAATTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAAGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTCAAACCAGGTACTGGGCTTACAGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGCTGAACTACCTCGGTGATCTTGTCCACACTAATCTGGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGAGGAAGTTTAGAGAACCATCTCTTTAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCAAAAGGTCTTGCCTTTCTTCATGAAGAAGCTCGGAGGCCTGTAATATATCGAGATTTCAAGACATCTAATATCCTATTAGATGCTGAATATAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTATCAACAAGAGTTATGGGAACATATGGTTATGCAGCTCCTGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTTTATAGTTTTGGGGTAGTGCTCCTTGAAATGCTTACTGGTCGACGAGCAATTGATAAAAATAGACCAAATGGGGAGCACAACCTGGTGGAATGGGCAAGACCAGCACTTGGAGACCGGAGGATGTTCTACCGAATAATCGATCCTCGTCTTGAAGGTCACTTCTCGATTAAAGGTTCACAGAAAGCCGCCCAACTTGCTGCTCAATGCCTTAGCCGTGATCCAAAATCTAGACCCGTGATGAGTGAAGTTGTTCAGGTTCTTAAGCCTTTGCCAAACCTTAAGGATATGGCCATTTCATCTCAGCACTTCCAGTTCACACGAGTAGATCGCACTATGTCCATGCCAAATCCCAAAAATGGTTCAAAAACACAGCTAACATCTGTATCAAGGAAAGGTCAACCTGTAAGGATCTTGTCGAGTCCAAACGGTCCACGTGGTTCTCCATATCATTATTCCAAGTCACCAAAACCTAACGGGTGA 1434 0.4344 MGFGNNAIQAGSLDVGKSNGRKKKDGAEKQSGCWAKFSCIGSCIPSRSKIDNSLSGGPSAHNVENRCTNENTKDRTVAPPESSTTTTSNAGSIPSTPIFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLVHTNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEARRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKNRPNGEHNLVEWARPALGDRRMFYRIIDPRLEGHFSIKGSQKAAQLAAQCLSRDPKSRPVMSEVVQVLKPLPNLKDMAISSQHFQFTRVDRTMSMPNPKNGSKTQLTSVSRKGQPVRILSSPNGPRGSPYHYSKSPKPNG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2131 477 Pfam Protein kinase domain 127 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2131 477 MobiDBLite consensus disorder prediction 429 454 - -
Prci1g2131 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Prci1g2131 477 FunFam Probable serine/threonine-protein kinase PBL8 210 425 - -
Prci1g2131 477 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Prci1g2131 477 ProSiteProfiles Protein kinase domain profile. 124 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2131 477 MobiDBLite consensus disorder prediction 429 477 - -
Prci1g2131 477 CDD STKc_IRAK 130 408 - -
Prci1g2131 477 Gene3D Transferase(Phosphotransferase) domain 1 210 429 - -
Prci1g2131 477 Gene3D Phosphorylase Kinase; domain 1 99 209 - -
Prci1g2131 477 PANTHER OS01G0588500 PROTEIN-RELATED 80 408 - -
Prci1g2131 477 MobiDBLite consensus disorder prediction 51 95 - -
Prci1g2131 477 SUPERFAMILY Protein kinase-like (PK-like) 105 405 IPR011009 -
Prci1g2131 477 MobiDBLite consensus disorder prediction 1 27 - -
Prci1g2131 477 FunFam Serine/threonine-protein kinase BIK1 92 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2131 Prci-Chr1 42178972 42183707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2131 110 421 Glycoside Hydrolase AT3G07070 55.732 2.78e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci1g2131 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2131 - - gmx:100305393 815.839