Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2121 ATGGAGACGACGATGATGATGATGAAAAGTGAAGAGAGCAAAAGGAGCCAACTCATGGAAGAAGATCAGTTCCAAGGAACCCGTTATGTCAAGAGACGGCGAAGAGAGTCTTGTGCGGCTGCTATTAATAACAATGATGCTCCAAGTGATCAGAAGCAACAGCAGCTGCAGCCACAGCTACAGGGTGATCAAAATTTAAGTACCAGCACTGTGAAAAGAAGTTCAAGATTTCGTGGTGTAAGCAGACATAGATGGACTGGTCGATTTGAAGCTCACCTGTGGGACAAGCTCTCTTGGAACATAACACAGAAGAAAAAAGGGAAGCAAGTTTACCTCGGGGCTTACGATGAAGAAGAATCAGCAGCAAGAGCGTACGATTTAGCTGCACTTAAGTACTGGGGAACAACAACTTTCACCAATTTTCCGATATCAGATTATCAGCAAGAGATGGAGATAATGGAGACCATGACCAAAGAGGAGTACTTGGCTACTTTAAGAAGAAAGAGCAGTGGCTTCTCAAGGGGCGTATCTAAGTACAGAGGCGTAGCAAGGCATCACCACAATGATAGATGGGAAGCAAGGATAGGAAGAGTGTTTGGAAACAAATACCTCTACCTTGGCACTTACAGCACCCAAGAGGAAGCAGCTCGTGCTTATGACATAGCAGCCATCGAGTACAGAGGGATCCATGCTGTGACAAACTTCGATTTGAGTACTTACATAAGATGGTTGAAGCCTACCAGAGAAAACATCCAAGAAGCAACACCTGAATCCCAGGTCGTAACAGAGGCTCAGGCAGGGACATCCCCGTCTATCTGCACCCCAAAAGAGGAGAAGAAATCCATGACCCTTCATAGTGATTCTGTCACAGATTACCTGAACTCCCCTTGCACGCAAGATTTCCTTGAAAGTAAAACCCCTTTAATCTCGAGCAGTAACAATAAGACATCTTCTCCCAGTGCCCTTGACCTTCTTTTTCGATCTTCAATATTCAGAGAACTACTCAAACGGAACCCAAATATATCTGGGGATGAAACTGATGGAGAAGAAACAAGGGATTTACAGCAGCTGACGGGTGATGTCAAGTTAGGTGGGATATTCTATGATGTGATTGGCAATGATGTCCCGTTTGACTGCGATCTCAGCAAGTACAACTCAGGATTGCAAGAAAGAGACTCCCAGTCCCTTCTATGA 1194 0.4489 METTMMMMKSEESKRSQLMEEDQFQGTRYVKRRRRESCAAAINNNDAPSDQKQQQLQPQLQGDQNLSTSTVKRSSRFRGVSRHRWTGRFEAHLWDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTTTFTNFPISDYQQEMEIMETMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNDRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLKPTRENIQEATPESQVVTEAQAGTSPSICTPKEEKKSMTLHSDSVTDYLNSPCTQDFLESKTPLISSSNNKTSSPSALDLLFRSSIFRELLKRNPNISGDETDGEETRDLQQLTGDVKLGGIFYDVIGNDVPFDCDLSKYNSGLQERDSQSLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2121 397 ProSiteProfiles AP2/ERF domain profile. 76 142 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 Gene3D AP2/ERF domain 75 144 IPR036955 GO:0003700|GO:0006355
Prci1g2121 397 Gene3D AP2/ERF domain 177 238 IPR036955 GO:0003700|GO:0006355
Prci1g2121 397 MobiDBLite consensus disorder prediction 7 39 - -
Prci1g2121 397 Pfam AP2 domain 75 134 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 Pfam AP2 domain 177 228 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 CDD AP2 177 238 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 FunFam AP2-like ethylene-responsive transcription factor 75 144 - -
Prci1g2121 397 CDD AP2 75 144 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 MobiDBLite consensus disorder prediction 254 276 - -
Prci1g2121 397 FunFam AP2-like ethylene-responsive transcription factor 177 238 - -
Prci1g2121 397 ProSiteProfiles AP2/ERF domain profile. 178 236 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 PRINTS Ethylene responsive element binding protein signature 218 238 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 MobiDBLite consensus disorder prediction 254 279 - -
Prci1g2121 397 SUPERFAMILY DNA-binding domain 75 144 IPR016177 GO:0003677
Prci1g2121 397 MobiDBLite consensus disorder prediction 42 75 - -
Prci1g2121 397 SMART rav1_2 76 148 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 SMART rav1_2 178 242 IPR001471 GO:0003700|GO:0006355
Prci1g2121 397 MobiDBLite consensus disorder prediction 1 77 - -
Prci1g2121 397 SUPERFAMILY DNA-binding domain 177 238 IPR016177 GO:0003677
Prci1g2121 397 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 41 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2121 Prci-Chr1 42104101 42106068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2121 72 275 AP2-EREBP Transcription Factor Family AT5G57390 59.906 9.93e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci1g2121 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2121 - - gmx:100792612 490.345