Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2114 ATGTTACGTTCAATAAACATCAAGGGACGCTTTAGATGGCAAAGACGCGGTACAGGTGGAAAAAGAGTTGTCTCTGTTTTGAAGGACACTTTTCACCAAAGTGTCTTAACAGGTGAATGCGTGCGGCTCGTGTTGGGTTCTGAAGAAATGGCTGGTGCTTTGGACCTCGGAAAGTCAAAAAGAAGGAAGAAAGAAGACGTTGAAGCTGGTAGAAGTCAGAAATGGTGGATGAAACTGGGTTTCTTCGTCGGAAGCTGCTTATTTTTGAAGCCCAAAGAGGACGGCTCTGGTATTAGTCTGCAGAATGAAAGCGACTCTACCAAAAAATCCGATCCAGGAGCTTCACCATCCTTGCCGCACTTTGAGGAAATAAAATTTTCTTCCAATCTTCGAAGGTTTTCTTTTGATGAGCTCAAGGAAATTGCAAGTAATTTTAGGCCCAGCAATATTCTTGGCCAGGGGGGTTTTGGATGTGTTTTTAAAGGTTTTATCAAACAAGCAAGAACAACTGGCTCGGAAGCGATTCCAGTTGCAGTGAAGATTCTTAACCATGCAGGACTTCAAGGCCACAAAGAATGGCTTACTGAAATTAATTATCTTGGCGCACTCCAGCATCCGAATCTAGTTAAATTAATAGGTTACTGCATTGAGCAAGAAAAAAGGTTGCTAGTGTACGAGTTTATGCCCCGAGGCAGCTTAGACAACCATCTGTTTAGAAGGACTACGCCCCTTCCGTGGTCGATCAGATTGAAGATTGTAGTTGGCGCTGCGAAGGGCCTCGCGTTTCTGCATGAAGAAGCTGACAGGACAGTGATCTTTAGGGACTTGAAAACATCTAATATCTTGTTGGATGCAGATTATAATGCAAAACTTTCTGATTTCGGACTGGCCAAAGATGGTCCCGAGGGTGACTCAACTCATGTGTCTACTCGGGTGATGGGAACATTTGGCTATGCAGCTCCTGAATACGTCATGACTGGACACCTTACTATCAAGAGTGATGTGTACAGTTTCGGGGTGGTTCTGCTGGAGTTGCTGACAGGGCGAAAGGCCATGGACAAGAATCGGCCTCGAGGCGAGCACAGCTTGGTGGAGTGGGCGAGGCCCAGCTTTGCGGACAGGAGGAGATTCTACAGGCTGATAGATCCTCGGCTTCAAGGTCATTACTCGATGAGAGGTGCTCAGACGGCGATCCAGGTCGCTGCTCGCTGCGTTGCCCGTCACCCCAAAGCTAGACCCATCATGTCCGAGGTTGTCGGAATCTTGGAGCCTTTGCTTGATCTCAACGACATGGCCCTCTCTTCAACCTCCTTCCAGTCCATGGCTTCTAGTTCTAGGATGCAAGCTCGTGGGCCGTCACAGCCTGGCTCGTCCTCCAGGAGCTTACCCAACTCGCCATTTCGCCCACACTATCCGCTTCCCTATCCCAGTCCCAAGGGAAATATCCCATGA 1452 0.4807 MLRSINIKGRFRWQRRGTGGKRVVSVLKDTFHQSVLTGECVRLVLGSEEMAGALDLGKSKRRKKEDVEAGRSQKWWMKLGFFVGSCLFLKPKEDGSGISLQNESDSTKKSDPGASPSLPHFEEIKFSSNLRRFSFDELKEIASNFRPSNILGQGGFGCVFKGFIKQARTTGSEAIPVAVKILNHAGLQGHKEWLTEINYLGALQHPNLVKLIGYCIEQEKRLLVYEFMPRGSLDNHLFRRTTPLPWSIRLKIVVGAAKGLAFLHEEADRTVIFRDLKTSNILLDADYNAKLSDFGLAKDGPEGDSTHVSTRVMGTFGYAAPEYVMTGHLTIKSDVYSFGVVLLELLTGRKAMDKNRPRGEHSLVEWARPSFADRRRFYRLIDPRLQGHYSMRGAQTAIQVAARCVARHPKARPIMSEVVGILEPLLDLNDMALSSTSFQSMASSSRMQARGPSQPGSSSRSLPNSPFRPHYPLPYPSPKGNIP 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2114 483 FunFam Serine/threonine-protein kinase BIK1 115 227 - -
Prci1g2114 483 MobiDBLite consensus disorder prediction 98 119 - -
Prci1g2114 483 ProSiteProfiles Protein kinase domain profile. 145 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2114 483 Gene3D Transferase(Phosphotransferase) domain 1 228 444 - -
Prci1g2114 483 MobiDBLite consensus disorder prediction 467 483 - -
Prci1g2114 483 CDD STKc_IRAK 151 425 - -
Prci1g2114 483 Gene3D Phosphorylase Kinase; domain 1 125 227 - -
Prci1g2114 483 MobiDBLite consensus disorder prediction 439 465 - -
Prci1g2114 483 SUPERFAMILY Protein kinase-like (PK-like) 130 449 IPR011009 -
Prci1g2114 483 Pfam Protein tyrosine and serine/threonine kinase 149 420 IPR001245 GO:0004672|GO:0006468
Prci1g2114 483 MobiDBLite consensus disorder prediction 98 113 - -
Prci1g2114 483 FunFam Probable serine/threonine-protein kinase PBL8 228 442 - -
Prci1g2114 483 PANTHER OS01G0588500 PROTEIN-RELATED 104 425 - -
Prci1g2114 483 ProSitePatterns Protein kinases ATP-binding region signature. 151 180 IPR017441 GO:0005524
Prci1g2114 483 SMART serkin_6 145 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2114 483 MobiDBLite consensus disorder prediction 439 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2114 Prci-Chr1 41958079 41968240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2114 122 422 Glycoside Hydrolase AT3G07070 51.307 1.16e-103 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci1g2114 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2114 - - pvy:116144945 512.301