Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2102 ATGGACTTGAGCTCCGCACCGGTCACCAACATCGCCGCCTCCAATTCTACCGCTGCGAAATCTCCGGAACCTGACACTGAAATTCCGACCCGGATCCAACCCGCCCCCTCCAAGTCCTTCTTCTCCAACGGCGTCCTCAAGCGCCACCATGCACACCACAAACAGCCCGTTGCGGCCATCTACAAAGAATGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCGCTCGACGGTTGTGGCGAATTCATGCCTTCTCCTAACGCCAATTCTGCCGACCCCAGCTCCATCAAATGCGCCGCCTGCGGTTGTCACCGCAATTTCCATCGCCGCGAACCCGAGGAGCCCACTGCGACCCACGTTATCGAGTTTCAGCCCCACCATCGGCACCACCCTCCGCCACCCCCGCCGTTTCAGGCTCCGAATCGGAGCCCCAATTCAGCTTCCCCGCCCCCGATCTCTTCTTCCTACTATCCCTCTGCACCCCACATGCTCCTGGCTCTCTCCGCCGGTTTATCGGCCCATCCGGAGAGCACGGCCGCTCCGGTGAATGCTTTGGGGACGCCGAATTTGAATTCGAGGAAGCGATTCAGGACCAAGTTCACGCAAGAACAGAAGGATAAAATGTACCAGTTCGCTGAGAGAGTGGGGTGGAAGATGCAGAAGAGAGACGACGAATTGGTGCAAGAGTTCTGCCACGAGGTCGGGGTGGATAGAGGTGTTTTGAAGGTTTGGATGCATAATAATAAGAATACTTTTGGGAAGAAAGATGCGACGAATGGGAATAGAAATGCTCTCGAGCTAGACGAGAACAACAATCACAACCATGAAATCGACGCCAACAATAACAACAACGGCAGCGCCCAGGGTCCAAATCATCACTACCAGAACGATAGTGGGGCGAACGCCGGTGCTAATGGGTCGTCTTCATCTTCTTAA 939 0.5538 MDLSSAPVTNIAASNSTAAKSPEPDTEIPTRIQPAPSKSFFSNGVLKRHHAHHKQPVAAIYKECLKNHAASLGGHALDGCGEFMPSPNANSADPSSIKCAACGCHRNFHRREPEEPTATHVIEFQPHHRHHPPPPPPFQAPNRSPNSASPPPISSSYYPSAPHMLLALSAGLSAHPESTAAPVNALGTPNLNSRKRFRTKFTQEQKDKMYQFAERVGWKMQKRDDELVQEFCHEVGVDRGVLKVWMHNNKNTFGKKDATNGNRNALELDENNNHNHEIDANNNNNGSAQGPNHHYQNDSGANAGANGSSSSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2102 312 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 40 252 - -
Prci1g2102 312 MobiDBLite consensus disorder prediction 131 148 - -
Prci1g2102 312 NCBIfam homeobox domain, ZF-HD class 194 251 IPR006455 -
Prci1g2102 312 SUPERFAMILY Homeodomain-like 188 255 IPR009057 -
Prci1g2102 312 MobiDBLite consensus disorder prediction 126 156 - -
Prci1g2102 312 Gene3D - 187 254 - -
Prci1g2102 312 MobiDBLite consensus disorder prediction 273 312 - -
Prci1g2102 312 MobiDBLite consensus disorder prediction 1 36 - -
Prci1g2102 312 FunFam Zinc-finger homeodomain protein 2 184 255 - -
Prci1g2102 312 MobiDBLite consensus disorder prediction 1 23 - -
Prci1g2102 312 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 61 112 IPR006456 -
Prci1g2102 312 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 61 112 IPR006456 -
Prci1g2102 312 Pfam ZF-HD protein dimerisation region 60 113 IPR006456 -
Prci1g2102 312 MobiDBLite consensus disorder prediction 277 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2102 Prci-Chr1 41815395 41817127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2102 1 262 ZF-HD Transcription Factor Family AT5G15210 51.673 1.09e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci1g2102 ZF-HD_dimer 4.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2102 - - qsa:O6P43_004486 348.206