Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2100 ATGAGTTATTCAGACAACATGAATGAAGACCGTATCATCGCTGTCTGCCTAGAACAAGTTTCGGTCCAGACCACCCCGTCGAGGCAATCTTCGTCATCGTCAAACGACGTCGTCATTTCAGTGGATGAGATCAGTGTATTCATGGAAGATATAACAAATGTTACGCATCTAGAAGCTGCGGCTGCATCGTCGGGAGAGATAAGACTGTGTCGTTTTTGCCATGAGGAAGACCTTGTCAGGCACCTTGAAGCACCCTGTGCTTGCAGTGGCACTATCATGTACGCCCACCGTCGTTGCACCACTGATTGGTGCAACACCAAGGGCGACATCCGGTGCGAGATTTGCCAGCAGCCCTACGGTCCTGATTATGCTGTGACGACTGAAAGCACATCGTCGACCCAAACCAGGCAAATCCTATCCCTCTTTTTTTCTCGCAATCTCTCCCCCCCCCCCCCCGGTGTATAA 465 0.5097 MSYSDNMNEDRIIAVCLEQVSVQTTPSRQSSSSSNDVVISVDEISVFMEDITNVTHLEAAAASSGEIRLCRFCHEEDLVRHLEAPCACSGTIMYAHRRCTTDWCNTKGDIRCEICQQPYGPDYAVTTESTSSTQTRQILSLFFSRNLSPPPPGV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2100 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 130 IPR013083 -
Prci1g2100 154 SMART ringv_2 69 116 IPR011016 GO:0008270
Prci1g2100 154 Pfam RING-variant domain 70 115 IPR011016 GO:0008270
Prci1g2100 154 SUPERFAMILY RING/U-box 66 119 - -
Prci1g2100 154 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 33 134 IPR033275 -
Prci1g2100 154 ProSiteProfiles Zinc finger RING-CH-type profile. 62 122 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2100 55 147 C3H Transcription Factor Family AT2G22120 33.333 1.18e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2100 - - pcin:129306560 283.108