Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2080 ATGACAATGTCGATCAGATTCATCTCCTTGATGATGATGCTTCATCTTGTTCTTATGGTTCCAATTCTCGGACAGCAACAGACAGGCTTCATCAGTATTGATTGTGGAGGTCCAGAGAATTTTGAGTATACAGATGATAGCGATCAAATAAAGTACAGCGCAGATGGAGCCTACATACAAACAGGGATCAACAAAAACATATCAGTTGAATACTCATATCCAAACAATCCCAATCTACCATTACCAATGTCAGATCTCAGAAGTTTTCCTCGGGGAAACAAAAATTGTTACACCTTAAGAACTGGAAGAAGAGGAAGCTTACATTTGATAAGGGCCTATTTTTTGTATGGAAATTATGATGGAAAAAACAGGCTTCCAGAATTTGATCTCTATATCGGTGTCAATTTCTGGTCCTCTGTGACTTTCAAGAATGCTTCAGAGCAAGTTATACTGGAAATTATCAGCATGGCAGAATCAGAGGTGACGAATGTTTGTCTTGTGAACAAGGGACTGGGAATTCCTTTTATCTCAGCATTAGAACTAAGACCACTCAATAGCTCTATTTATAATACAGAATTTGGAGCATCTGCTTCACTGTTACTTTTCAAAAGATGGGACCTTGGAGAAACTGATGGTAGTGGTAGATATGAAGATGACATGTATGACAGAATTTGGCACCCATATGACTCATCTTCCTGGGATTCTGTCAGCACTTCTCATGCTATAAATGGCAATAAAAATGGTTATAGAGCTCCATCTGAAGTGATGAGAACTGCTGCCAGACCCAAGAATTTTAGTGTTCCTTTAGAATTCTCTTGGACACCAAATGATCCAAATTTAAAATTCTATGTCTACTTGTATTTTGCTGAGGTGAAACAGCTTGAGATTAACGAACTAAGGAAATTCAGGATATCCTGGAATGGACATTCATTGTTTGGACCCTTGGTCCCAAGCTACTTAGTTTCAACCACAGCGTCAAATTTGAAGCCCTTGATGGGAAATGAACATCGACTTTCTCTTCATAGAACTGAAGATTCAACCCTTCCACCCATCCTTAATGCAGTTGAGATATTTGAAGTCAGAATGCTGGATGCTTTTCCAACACTTGAGAAAGATGTAAATGCTATGATGGGTATCAAAAATGCATATGGAATTCAAAGAAACTGGCAGGGTGATCCGTGTGAGCCAAAGAACTACACTTGGGAAGGCTTAACATGCAACTATAGCAGTTCACATCCTCCACGAATTGTATCTCTGAATCTGAGCTCAAGCAGTTTGACTGGGGTGATTGCTTCTGCCATCTGCAACCTCTTGTCACTTGAAGCATTGGATTTATCGAACAACAGCTTATCTGGATCAATTCCGAAGTTTCTGGTTGAAATGAGGTCTCTTAAAATTTTGAATTTGAAAGGCAACCAACTATCAGGTTTTGTCCCTACAGCTCTTCTGAAGAAATCAAGGGCAGGATTGCTTAAACTGAGTGTGGATGCCCAGAATCTTTGTGGCTCAGATAAGTGCGAGAAGAAGCTAAATGTATTTGTTCCCATAGTTGCTACTATATCATCGCTTCTAGTTTTGCTGATTGCTTTTATTATAATCAGGAAAGTTAGAAGAATTATGCAATCAGATAAGGAGACTAGTAATCCCGACAAAGAAGGAACACTTGTGGCATCAAAGAAGTGGCAATATAGTTATGCAGATGTATGGGGCATCACCAGCAACTTTAAAATTATCATTGGGAAGGGGGGATTTGGGATTGTGTACCGTGGTCAGATGAAAGATGGGAGCCAAGTAGCAGTAAAGATTCTTTCTCCATCATCATCTCAAGGGCCAAGGGAATTTCAGACGGAGGCTGAGCTTTTGATGACAGTCCATCACAAAAATTTGGTTGCCTTCATTGGTTATTGCGATGATGGAAGAAAAATGGCACTCATATATGAGTATATGGCAAATGGAAATCTCAAAAACTATCTTTCAGCAAGAAATTCACGTTGCTTGAGTTGGGGAAGGAGACTTCAGATAGCAATTGACGCTGCACAGGGATTGGAGTATTTACATCATGGATGCAAGCCACCTATAATACATAGAGATGTGAAGACGGCCAATATTCTTCTAGGTGAAAAGTTGGAAGCTAAGATAGCAGATTTTGGCCTCTCCAAAGTATTTGAGAATGAAACTAGAGGCGTAGGATCTTCAATGAGTGCAAGTGATCAAGGAAATGCAGAGCCTACTGTTATGGGCACCAAAGGATACTACAAATCAAGGAGGTTGAACGAGAAAAGTGACATCTATAGCTTTGGAATTGTTCTGTTGGAGCTAATTACAGGTCAATCTGTTGTATTAAAGGGAAAGGAATCAGTTCACATACTTGACTGGTTAAGACCTGAGCTTCGAAGAGGAGATTTGAGCAAAATTGTAGATCCAAAGCTGCAAGGTAAATACAATGCATGTTCTGTGTGGAAGGCTTTAGGAGTAGCAATGGCATGTACTGCACCAGCCTCTATTCATAGACCTACAATGAGTTGTGTGTTATCTGAGCTAAAAAAGTGTTTTGAAACGGAAGTGCCTAGTCAGAGTGAAACATATACGCTACCAGCTCAAATTTATGGGGACTTGCATTGTTTGTCTGAGACATATTCCTTGGATGATGAATCTATCACCTATCCTTTTCCAAGATAG 2679 0.3975 MTMSIRFISLMMMLHLVLMVPILGQQQTGFISIDCGGPENFEYTDDSDQIKYSADGAYIQTGINKNISVEYSYPNNPNLPLPMSDLRSFPRGNKNCYTLRTGRRGSLHLIRAYFLYGNYDGKNRLPEFDLYIGVNFWSSVTFKNASEQVILEIISMAESEVTNVCLVNKGLGIPFISALELRPLNSSIYNTEFGASASLLLFKRWDLGETDGSGRYEDDMYDRIWHPYDSSSWDSVSTSHAINGNKNGYRAPSEVMRTAARPKNFSVPLEFSWTPNDPNLKFYVYLYFAEVKQLEINELRKFRISWNGHSLFGPLVPSYLVSTTASNLKPLMGNEHRLSLHRTEDSTLPPILNAVEIFEVRMLDAFPTLEKDVNAMMGIKNAYGIQRNWQGDPCEPKNYTWEGLTCNYSSSHPPRIVSLNLSSSSLTGVIASAICNLLSLEALDLSNNSLSGSIPKFLVEMRSLKILNLKGNQLSGFVPTALLKKSRAGLLKLSVDAQNLCGSDKCEKKLNVFVPIVATISSLLVLLIAFIIIRKVRRIMQSDKETSNPDKEGTLVASKKWQYSYADVWGITSNFKIIIGKGGFGIVYRGQMKDGSQVAVKILSPSSSQGPREFQTEAELLMTVHHKNLVAFIGYCDDGRKMALIYEYMANGNLKNYLSARNSRCLSWGRRLQIAIDAAQGLEYLHHGCKPPIIHRDVKTANILLGEKLEAKIADFGLSKVFENETRGVGSSMSASDQGNAEPTVMGTKGYYKSRRLNEKSDIYSFGIVLLELITGQSVVLKGKESVHILDWLRPELRRGDLSKIVDPKLQGKYNACSVWKALGVAMACTAPASIHRPTMSCVLSELKKCFETEVPSQSETYTLPAQIYGDLHCLSETYSLDDESITYPFPR 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2080 892 PANTHER OS07G0107800 PROTEIN-RELATED 31 851 - -
Prci1g2080 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Prci1g2080 892 Pfam Malectin-like domain 33 360 IPR024788 -
Prci1g2080 892 SUPERFAMILY L domain-like 385 484 - -
Prci1g2080 892 FunFam Os07g0541700 protein 649 736 - -
Prci1g2080 892 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Prci1g2080 892 FunFam Leucine-rich repeat receptor-like protein kinase 550 648 - -
Prci1g2080 892 FunFam Leucine-rich repeat receptor-like kinase 371 503 - -
Prci1g2080 892 SMART serkin_6 573 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2080 892 ProSiteProfiles Protein kinase domain profile. 573 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2080 892 Gene3D Transferase(Phosphotransferase) domain 1 650 866 - -
Prci1g2080 892 Pfam Protein tyrosine and serine/threonine kinase 578 788 IPR001245 GO:0004672|GO:0006468
Prci1g2080 892 Gene3D Ribonuclease Inhibitor 373 489 IPR032675 -
Prci1g2080 892 Pfam Leucine rich repeat 415 474 IPR001611 GO:0005515
Prci1g2080 892 Gene3D Phosphorylase Kinase; domain 1 579 649 - -
Prci1g2080 892 SUPERFAMILY Protein kinase-like (PK-like) 558 847 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2080 Prci-Chr1 41643025 41647359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2080 9 861 Receptor kinase-like Gene Family AT4G29180 51.370 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci1g2080 Malectin_like 3.9e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2080 - - lang:109342711 1205.28