Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2067 ATGAACAAGATGAGCAATTTGAGCTCTGTGAACAGTTGTGATCTGATAGATGCGAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAACCAAACCGGACTGGCTAGGTCTTCCGGCTGGCGTGAAGTTTGATCCGACGGACCAAGAACTAATCGAACACCTCGAAGCCAAAGTGGAGTCCAAGAACATGAAATCTCACCCTTTGATCGACGAGTTCATTCCCACTATTGAAGGAGAAGATGGAATTTGTTATACCCATCCTGAGAAACTCCCAGGAGTAACAAGGGACGGGTTGAGTAGGCACTTCTTTCACAGACCTTCGAAGGCTTACACGACCGGAACAAGAAAGAGGAGAAAAATCCAGAACGAGAGCGAGATGCAAGGAGGAGAAACGCGGTGGCACAAGACGGGGAAGACGAGGCCGGTGATGGTGAACGGCAAGCAAAAGGGCTGCAAGAAGATTCTCGTGCTCTACACCAACTTCGGCAAGAACCGAAAGCCCGAGAAGACCAACTGGGTGATGCATCAGTACCATCTGGGCCAGCACGAGGAGGAGAAAGAAGGAGAGCTCGTCGTGTCCAAGATTTTCTACCAGACTCAGCCCAGACAGTGCAATTGGTCCGACAGGTCAGCCACCACCGGCGAACCCAGCGGCGACTTCGTTAATGCCAATAGCAGGAGAGACAGTGGGAGTGGGAGCTGTTCTTCTTCTAAGGAGATCAACAACGTTGTTGTCACAGCTCACAGGGATGATCAGATGTCCGCGGTCGTCGGTGTTGTTCCTCCCATGTCGTCGTACCTTCATCATCACCATCATCATCCCTTGGATATTCAACAACACCTCAAACCCGACCACTTTGGATTCATTCCGTTCCGGAAAAGCTTTGACGAGGTGGGAATAGGAGAGGGTTCAATGGGGAGAGATCAAGTGCAGCCATCAGGCGAAGAAGTTAATGAAGGACAAAGGCAGCAACAGCAACATCATCATCATCAAGTGGCTCAGCATCATCAGCAACATCAGAATATGGCGACCACGACAGCTTTCCATATAGGCAGGCCTTCACTTCCGATCTCTAACATAATCTCTCCTCCACCTCTCCACCACACTTCCATCATCCTCGATGATAACTCCTACCATGTCTCCAGAATCATGCTCCAAAACGACAACTTTCAGCAACAGCAGCAGCAACATCATAAACTAGGAGGAAGCTCTGCGTCTGGTTTGGAGGAACTCATAATGGGATGCACTTCATCAACTGATATTAAAGCGGAATCATCAGTCTCCGTCACAAACCCTCAAGAAGCTGAATGGCTCAAATACTCTTACTGGCCCGACCCGGATAACCCAGATCATCACGGGTAG 1392 0.4971 MNKMSNLSSVNSCDLIDAKLEEHQLCGSKQCPGCGHKFETKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESEMQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEPSGDFVNANSRRDSGSGSCSSSKEINNVVVTAHRDDQMSAVVGVVPPMSSYLHHHHHHPLDIQQHLKPDHFGFIPFRKSFDEVGIGEGSMGRDQVQPSGEEVNEGQRQQQQHHHHQVAQHHQQHQNMATTTAFHIGRPSLPISNIISPPPLHHTSIILDDNSYHVSRIMLQNDNFQQQQQQHHKLGGSSASGLEELIMGCTSSTDIKAESSVSVTNPQEAEWLKYSYWPDPDNPDHHG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2067 463 MobiDBLite consensus disorder prediction 128 147 - -
Prci1g2067 463 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 350 IPR044799 GO:0003700
Prci1g2067 463 MobiDBLite consensus disorder prediction 128 148 - -
Prci1g2067 463 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Prci1g2067 463 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Prci1g2067 463 FunFam NAC domain-containing protein 73 56 212 - -
Prci1g2067 463 MobiDBLite consensus disorder prediction 214 247 - -
Prci1g2067 463 SUPERFAMILY NAC domain 42 208 IPR036093 GO:0003677|GO:0006355
Prci1g2067 463 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Prci1g2067 463 MobiDBLite consensus disorder prediction 311 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2067 Prci-Chr1 41533037 41538678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2067 13 460 NAC Transcription Factor Family AT5G56620 52.350 2.02e-140 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g2067 NAM 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2067 - - gmx:100795246 702.59