Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2066 ATGAAGATTGTGCAATTGGACGATGTGGAATCCAGTAGGGACGAAGGGGGTTATGAGAACCAGATTGTGAGGGTTGATGCAAAGAGAGTGTTAGTTGGAGCAGGTGCTCGGATCCTGTTTTACCCGACTCTTTTGTATAATGTGCTTCGGAATAAGATTGAAGCTGAGTTCAGGTGGTGGGATCAAGTCGATGAGTTTTTGTTACTGGGTGCTGTTCCATTCCCTAAAGATGTTCCACGCTTGAAGAAGCTTGGCGTGGGTGGTGTAATTACTTTGAATGAACCTTATGAAACGTTGGTACCGTCATCATTATATCATGCTCATGAGATCGATCATTTAGTGATTCCTACAAGGGATTATCTGTTTGCCCCTTCACTAGAGGATATTAACCGAGCTGTGCAATTCATTCATCAAAATGCATGTTGCGGTAAAACCACCTATGTTCACTGCAAAGCTGGTCGAGGCAGAAGTACAACGATTGTTCTTTGTTATTTGGTTGAATATAAGCACATGACACCTGCAATTGCCCTGGATTATGTGAGGTCTCGCAGACCTAGGGTGCTGCTAGCACCATCACAATGGAAGGCTGTTCAAAACTACAGCAAGCACCGACCTTCTCTTTCTCCTGGTGCTAGGCCTACCCCTACCCCTATGCCATACTCTCCTTCTAGGGACGCAGTCCTTATAACCCAAGCTGATCTTGAGGGTTACCATAGTGCATGCGATGCTGGCATGCAGCTGGCCATCGTTACTAAAGTGCCGAAGGCCAAGCCCATGATAGCAAGACTATCTTGCCTGTTTGCATCCCTTAAAGTTTCTGGAAGCACTGTCCCGGCGATCAGGCGGTTGCCAATTTCTGAGGCCCGTGCTTGCTAA 876 0.4669 MKIVQLDDVESSRDEGGYENQIVRVDAKRVLVGAGARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHEIDHLVIPTRDYLFAPSLEDINRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAIALDYVRSRRPRVLLAPSQWKAVQNYSKHRPSLSPGARPTPTPMPYSPSRDAVLITQADLEGYHSACDAGMQLAIVTKVPKAKPMIARLSCLFASLKVSGSTVPAIRRLPISEARAC 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2066 291 FunFam Dual specificity phosphatase domain protein 59 206 - -
Prci1g2066 291 CDD PTPMT1 59 203 IPR044596 GO:0004721
Prci1g2066 291 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 269 - -
Prci1g2066 291 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Prci1g2066 291 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Prci1g2066 291 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Prci1g2066 291 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Prci1g2066 291 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 202 IPR029021 -
Prci1g2066 291 Pfam Dual specificity phosphatase, catalytic domain 81 201 IPR000340 GO:0008138|GO:0016311
Prci1g2066 291 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2066 Prci-Chr1 41526560 41529264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2066 9 271 Protein tyrosine phosphatase (PTP) family AT2G35680 52.667 1.26e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2066 - - gmx:100817410 491.5