Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2060 ATGTCTTGGCAATCTTACGTAGATGAGCACTTGATGTGCGATGTCGGTGATGGCCACACCCTCGCTTCCGCTGCCATTACGGGTCACGATGGCTCTGTATGGGCTCAGAGCTCTAATTTCCCTCAGTTTAAACCTGAAGAAATCAAAAATATCATGAAAGATTTTGACGAGCCGGGTCATCTTGCGCCTACAGGATTGCATCTTGGAGGTAACAAATACATGGTAATCCAGGGAGAGCCCGGAGCTGTCATTCGGGGGAAGAAGGGATCTGGAGGCATCACCATAAAGAAAACTGGGCAAGCTCTAATTTTTGGCATCTATGAGGAACCTGTCACTCCTGGACAATGTAACATGGTTGTTGAGAGGTTGGGAGATTACCTCGTTGATCAGGGTCTGTAG 399 0.4787 MSWQSYVDEHLMCDVGDGHTLASAAITGHDGSVWAQSSNFPQFKPEEIKNIMKDFDEPGHLAPTGLHLGGNKYMVIQGEPGAVIRGKKGSGGITIKKTGQALIFGIYEEPVTPGQCNMVVERLGDYLVDQGL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2060 132 SMART prof_2 1 132 IPR005455 GO:0003779
Prci1g2060 132 FunFam Profilin 1 132 - -
Prci1g2060 132 PRINTS Profilin signature 22 31 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Profilin signature 41 61 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Profilin signature 101 114 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Profilin signature 65 79 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Profilin signature 114 131 IPR005455 GO:0003779
Prci1g2060 132 CDD PROF 2 131 IPR005455 GO:0003779
Prci1g2060 132 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Prci1g2060 132 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Plant profilin signature 28 41 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Plant profilin signature 53 67 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Plant profilin signature 72 81 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Plant profilin signature 85 100 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Plant profilin signature 105 118 IPR005455 GO:0003779
Prci1g2060 132 PRINTS Plant profilin signature 118 131 IPR005455 GO:0003779
Prci1g2060 132 SUPERFAMILY Profilin (actin-binding protein) 2 131 IPR036140 -
Prci1g2060 132 Pfam Profilin 1 131 IPR005455 GO:0003779
Prci1g2060 132 Gene3D Dynein light chain 2a, cytoplasmic 1 132 - -
Prci1g2060 132 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2060 Prci-Chr1 41486623 41489002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2060 1 132 Cytoskeleton Gene Families AT4G29340 82.836 1.09e-81 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2060 K05759 - jre:109018861 236.884