Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2057 ATGAAGACCAAGACGCCATTAAAGCAACTCAAGCTCGCTGTTCCTGCTCAAGAAACCCCCATCTCCTCATTCCTGACTGCAAGTGGCACATTTCATGACGGAGATCTGCTCTTGAACCAGAAAGGATTGCGACTCATCTCAGAAGAAAAAGAATCGCGGCCTTCTGATAGTAAGGAACTTGATTTTGACTTCACATTGGAAGACCTTGAGACCATCAAAGTGATTGGAAAGGGCAGTGGTGGTGTAGTGCAACTTGTTCGCCATAAGTGGGTTGGAAAATTATTTGCCTTGAAGGTTATTCAGATGAACATACAAGAGGAGATTCGAAAACAGATTGTACAGGAGCTGAAAATTAACCAAGCATCACAATGCCCACATGTTGTAGTTTGTTACCACTCTTTCTACCATAATGGAGCCATATCTCTTGTGCTAGAATACATGGATCGTGGTTCTCTAGCAGATGTGATCAGACAAGTTAAAACAATTTTGGAACCATATCTTGCAGTTGTTTGTAAGCAGGTCTTGCAAGGTCTTGTTTACTTGCATCATGAAAGACATGTAATTCATAGGGACATCAAACCATCCAATCTGTTAGTTAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAAGCTCAATGGGCCAAAGAGATACATTTGTTGGAACTTACAACTATATGTCGCCGGAAAGAATCAGCGGGAGTACTTATGATTATAGCAGCGACATCTGGAGTTTGGGCATGGTAGTACTTGAGTGTGCCATAGGGCGGTTTCCTTATATACAATCTGAAGATCAGCAAAATGGGCCCAGCTTTTATGAGCTTTTGGAAGCAATCGTGGAAAGCCCACCACCTTCTGCACCGTCAGATCAGTTTTCTCCAGAGTTCTGTTCATTTGTGTCATCCTGCATACAAAAGGATCCTCGTGATAGATTGACATCCTTGGAACTTCTGAGTCATCCTTTTATAAAGAAGTTTGAAGACAAGGATTTAGATCTTGGGATTCTGGTGAGTGAATTCTCTGTTTTTTCACCGACGCAATGCTGCAAATTGTAA 1074 0.4199 MKTKTPLKQLKLAVPAQETPISSFLTASGTFHDGDLLLNQKGLRLISEEKESRPSDSKELDFDFTLEDLETIKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEEIRKQIVQELKINQASQCPHVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQNGPSFYELLEAIVESPPPSAPSDQFSPEFCSFVSSCIQKDPRDRLTSLELLSHPFIKKFEDKDLDLGILVSEFSVFSPTQCCKL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2057 357 Gene3D Transferase(Phosphotransferase) domain 1 150 348 - -
Prci1g2057 357 SUPERFAMILY Protein kinase-like (PK-like) 66 341 IPR011009 -
Prci1g2057 357 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Prci1g2057 357 SMART serkin_6 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2057 357 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 15 331 - -
Prci1g2057 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Prci1g2057 357 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2057 357 FunFam Mitogen-activated protein kinase kinase 6 150 347 - -
Prci1g2057 357 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
Prci1g2057 357 FunFam Mitogen-activated protein kinase kinase 6 39 148 - -
Prci1g2057 357 CDD PKc_MAPKK_plant_like 67 333 - -
Prci1g2057 357 Pfam Protein kinase domain 70 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2057 Prci-Chr1 41469857 41474127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2057 1 343 MAP Kinase Kinase Gene Family AT5G56580 89.244 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Prci1g2057 Pkinase 2.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2057 K04368 - gmx:100786284 652.129