Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2039 ATGGATAACTTGTTCGTTTCAGAAGCCGACGACCTGGGCGCCATGGGATACCTGCGCCCACCTCCCAACTACTCCATCGATTTGGGGGCTTTCGACCTCGATGAGGCTCTCGCCTCCGCCGGGGATTCATGCCGCCGGTTCGCCGAGTCTAAGAGCTTCGTGTCCACGTTGCCGGAGGTTCAAGACACGGACGCCGATGCTGTTTGCTCGGTTTGCATGGAAGCGTTTGACTCTCGCGGCGGAAACAAACGAATATCCTGCGGACACGTGTACCACGCAAGCTGCATCACCGCCTGGATCTCTCGCTATGACGGCGACATTGGTCGGGACTTTAGGGGTCCTGGTCGGCTGGTCCTAAAAGTCTGA 366 0.582 MDNLFVSEADDLGAMGYLRPPPNYSIDLGAFDLDEALASAGDSCRRFAESKSFVSTLPEVQDTDADAVCSVCMEAFDSRGGNKRISCGHVYHASCITAWISRYDGDIGRDFRGPGRLVLKV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2039 121 Pfam Ring finger domain 69 101 IPR001841 -
Prci1g2039 121 SUPERFAMILY RING/U-box 61 102 - -
Prci1g2039 121 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 105 IPR013083 -
Prci1g2039 121 ProSiteProfiles Zinc finger RING-type profile. 69 99 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2039 Prci-Chr1 41266864 41267634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2039 3 101 C3H Transcription Factor Family AT5G01980 34.286 2.09e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2039 - K22378 gmx:102669154 92.4337