Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1g2022 | ATGGCTGAGCTACCCTGCTCAGAGATAGAGACAAGCATTTACACAAACTGGTCCTCACACTCTCCGTCCTCGTCCTCGTCCTCGTCCTCAACATCTGGACTGTCTCCGTCTCAGTCATTGCCAAACTCTGCTTCTGAGCCATTGCCAGCACAACAGAGGAAGCTCAAGCGGGGGCGGGATAGCAGCAACAGCAAGCATCCCGTGTACAGAGGGGTTCGAATGAGGGCGTGGGGTAAGTGGGTGTCGGAAATCCGGGAGCCCAGGAAAAAGAACCGGATCTGGCTCGGCACCTTCGCCACTCCGGAGATGGCGGCGCGTGCCCACGACGTGGCCGCGCTCGCTATCAAAGGCCATTCTGCCATTCTCAACTTCCCGGAACTCGCGGGTTCCCTGCCCCGACCTGCTTCCAACTCCCCCAGAGATGTTCAGGCCGCCGCAGCTAAGGCCGCTGCCATGGAGGTATTCAGTCCTCCGACGAAGTCGCTCTCGTCTTCCTCTTCGTCGTCGTCATTGGCAATGTCCTCCTCCTCCTCTGGCGACCCGTCCACCCCGGAGTTACTGGGCGAGATAGTGGAGCTGCCGCCTCTGGGGAGCAGTTTCGAGTCGCCCGACCCGGGCAACGATTTCGTGTTTTTTGACCCGGTGGATGGGTGGCTCTACCCTCACCCATGGTATCACAGCATTTATGGTGAAAAGGATTGTGGTGGGTTTTTCCTTGCGGATGACACGTTAATGCAAGAAGCAGAGAGTATGGCCCAGTGTGTATTTGAGAGCTCATTGTGGCAAAATTAA | 792 | 0.572 | MAELPCSEIETSIYTNWSSHSPSSSSSSSSTSGLSPSQSLPNSASEPLPAQQRKLKRGRDSSNSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGHSAILNFPELAGSLPRPASNSPRDVQAAAAKAAAMEVFSPPTKSLSSSSSSSSLAMSSSSSGDPSTPELLGEIVELPPLGSSFESPDPGNDFVFFDPVDGWLYPHPWYHSIYGEKDCGGFFLADDTLMQEAESMAQCVFESSLWQN | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1g2022 | 263 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 32 | 198 | - | - | |
Prci1g2022 | 263 | MobiDBLite | consensus disorder prediction | 16 | 49 | - | - | |
Prci1g2022 | 263 | MobiDBLite | consensus disorder prediction | 16 | 68 | - | - | |
Prci1g2022 | 263 | SMART | rav1_2 | 68 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2022 | 263 | FunFam | Ethylene-responsive transcription factor 2 | 67 | 126 | - | - | |
Prci1g2022 | 263 | MobiDBLite | consensus disorder prediction | 157 | 183 | - | - | |
Prci1g2022 | 263 | CDD | AP2 | 69 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2022 | 263 | SUPERFAMILY | DNA-binding domain | 68 | 126 | IPR016177 | GO:0003677 | |
Prci1g2022 | 263 | Pfam | AP2 domain | 67 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2022 | 263 | PRINTS | Ethylene responsive element binding protein signature | 91 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2022 | 263 | PRINTS | Ethylene responsive element binding protein signature | 69 | 80 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2022 | 263 | Gene3D | AP2/ERF domain | 68 | 126 | IPR036955 | GO:0003700|GO:0006355 | |
Prci1g2022 | 263 | MobiDBLite | consensus disorder prediction | 157 | 187 | - | - | |
Prci1g2022 | 263 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
Prci1g2022 | 263 | ProSiteProfiles | AP2/ERF domain profile. | 68 | 125 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci1g2022 | Prci-Chr1 | 41079937 | 41081299 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1g2022 | 40 | 227 | AP2-EREBP Transcription Factor Family | AT5G11590 | 61.576 | 1.39e-65 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Prci1g2022 | AP2 | 2.9e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1g2022 | K09286 | - | qsa:O6P43_003984 | 306.219 |