Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2017 ATGGGTTGCGTTTATTCAAGGGTTTGCATAGGTGAGGTTTGTAGCCCAAGAAATTCCGGGATAAATGAAGGTCGAAATGCGAAAACTAGTGAGGCTGCTTGGTTGTCTCCTGCGTCCTCGGATGTTCAGGAAGGTGAAGTTAGAGACCAATTTAATCAATTGAGCTTAACCAGAGACTCTGAAGCAGGCATCAGAAGGCTAGCTAGGGTTTCAGCGCAGTTTCTACCTCCTGATGGCTCGCGAGCAGTGAAGGTTCCTTCGGGAAACTTTGAATTGCGTTATTCGTACTTGTCACAGAGAGGTTACTACCCTGATGCTCTAGATAAGGCCAACCAAGATAGTTTTTGCATTCACACCCCATTTGGTACCCACCCTGATGATCATTTCTTTGGGGTTTTCGATGGGCACGGAGAGTTTGGGACTCAGTGTTCGCAGTTCGTGAAGCGAAAGCTATGTGAGAATTTGCTTAGAAATAGTAAATTTCGAGTAGATGCTGTGGAGGCTTGTCACGCTGCGTTCTTGGCGACAAACTCGCAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGCACTACAGCAATTACGGTATTGGTTCGGGGTAGGACAATATACGTGGCCAATTCAGGTGATTCTAGGGCGGTGATTGCAGAGAGGAGAGGAAACGATGTTGTGGCAGTAGACTTGTCCATGGATCAAACACCTTTTAGGCAAGACGAACTTGAAAGGGTCAGGCTTTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGGCTTAAGAATCCTGATGTTCAATGTTGGGGTACAGAAGAAGGAGATGATGGTGATCCGCCTAGATTGTGGGTTCCGAACGGGATGTACCCTGGTACAGCTTTCACTAGAAGCATTGGTGATTCAGTTGCCGAGACCATTGGCGTCGTTGCTACCCCAGAAATTGTTGTTTTCGAGCTCACACCAAACCATCCTTTCTTTGTGCTTGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGCCAGACTGTGGTTGAAATGGTTTCTAAATTCAAAGATCCTCGCGATGCTTGTGCTGCAATTGTGGCTGAATCTTATCGACTTTGGTTGCAATATGAAACTCGTACGGATGATATTACCATTATTGTTGTTCATATTAACGGACTAAACGATCCTGCTGTTGGTCAATCTGCCAGCTATGGTGATGTTCTTAGAACTCCAGTTCCTCAAGTTGTTGAGGTGACAGGATCAGAATCACCTTCCACCTTGGGCTGGTACTCCAAGAACCCTCGGGCAAGGCATGACTTATCAAGGGCGCGTCTCCGAGCAATTGAAAATTCCTTAGAAAATGGGCAAACTTGGATTCCTCCATCTTCTGCTCATAGGAAAACATGGGAGGAAGAAGCACAAATTGAGCGGGCATTGCACGATCATTTTCTCTTCAGAAAGCTTACCGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAAAAAAATGGGGAATTGCCTAGGGTTCTGCAGCGCTACACAGCAGAAAAATTGTCTTGTTTTGGAGAACTTGCTCTCATGTATAATAAACCACTTCAGGCTTCTGTACGTGCTGTAACTGAAGGAACTCTATGGGCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCGAAGTTCTCTAACTTATCATCTTTGAAGTTGCTTCGGTCTGTTGATCTCCTTTCAAAGTTGACAATCTTACAACTCAGTCAGATCTCAGAGTCCCTCTCTGAAGTTTCCTTTTCAAATGGACAAATAATAATTGATCAAAATGAAGCCTCTGCATTGTACATAATTCAGAAGGGACAAGTGAGAATAACTTTTGATTCAGATTTACTGAGAAACCCAAATGCCTGTAGCCTGAAGCCTGACTGTCAAAATGAGAATGATGATTTACAGAGCACGAAGGACGTATCAATAGAGAAGCCGGAGGGAAGCTATTTCGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACCTTAAGTGCTGTGGCTGTGGGTGATGTGTTATGTACTGTACTAACAAAGGAAAAATTTCAATCAGAAATTGGCCCCTTGAAAAAGTTGTCTAAGGAAGATCAGAAGTCAAGGGACAATTCATCAGACTATTTGAAGGAATCAAGTAAAAGTATTAATTTTTCTTCACTTGATAAAATCCATATCTCAGATTTGGAGTGGAAAAAGAGTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTATTAGGAGACTCAGAGAATATGCTTACTTTGAAGAGGTTTTCTAAGCAAAAGGTGAAAAGGCTGGGAAAGGAAGCACAAGTTTTAAAAGAGAAAAATTTGATCAAGGGCACGAGCCCTTCGGCTTGTATACCACAGGTTCTGTGCACCTGTGCTGATCGAGTTTATGCTGGGATACTACTAAATACACGCCTTGCTTGTCCATTGTCTTCCATACTTACAAGTCCTTTTGGTGAATCATCAGCTCGATTTTGTGCTGCTTGTGTTGTTACTGCCTTGGAAGATTTACATAAGAATGGTGTTCTTTACAGAGGGGTATCACCTGATCTTCTGACTTTGGACCAAACTGGATGTATACAGCTTGTGGACTTCAGGTTTGGGAAGAAACTCTCAGATGAAAGAACATTCACAATTTGTGGAATGGCAGACTCATTAGCTCCAGAGATTGTTCTGGGAAAAGGCCACAGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTTTGATTTATTTTATGTTACGAGGTGAGATGCCTTTTGGATCGTGGAGAGAAAATGAGCTTGATACAGTGGCCAAAATTGCAAAAAGGAAGCTGAACCTTCCAGAAACTTTCAGCCCGGAGGCTATTGATCTCATCACTAAGTTACTTGATGGTGACGAAAGCACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAAAGCCATCCTTGGTTTAATGGTGTTGACTGGGAAGGGATAAGAAATCATAGCTTTCCTGCTCCTCCAGAAATTCTCTCTCGTATAACTCTATACCTGGAAATTCATTCCGAGGATTGCACCGGTTCCCAAGTTTCCCCGTCACAAGAGGTAGATGAACTTAACATTCCTGAATGGCTTGAGGACTGGTAG 3237 0.4337 MGCVYSRVCIGEVCSPRNSGINEGRNAKTSEAAWLSPASSDVQEGEVRDQFNQLSLTRDSEAGIRRLARVSAQFLPPDGSRAVKVPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTHPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSKFRVDAVEACHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGNDVVAVDLSMDQTPFRQDELERVRLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSVAETIGVVATPEIVVFELTPNHPFFVLASDGVFEFLSSQTVVEMVSKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHINGLNDPAVGQSASYGDVLRTPVPQVVEVTGSESPSTLGWYSKNPRARHDLSRARLRAIENSLENGQTWIPPSSAHRKTWEEEAQIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEKNGELPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWALRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQISESLSEVSFSNGQIIIDQNEASALYIIQKGQVRITFDSDLLRNPNACSLKPDCQNENDDLQSTKDVSIEKPEGSYFGEWTLLGENIGTLSAVAVGDVLCTVLTKEKFQSEIGPLKKLSKEDQKSRDNSSDYLKESSKSINFSSLDKIHISDLEWKKSVYSTDCSEVGLTLLGDSENMLTLKRFSKQKVKRLGKEAQVLKEKNLIKGTSPSACIPQVLCTCADRVYAGILLNTRLACPLSSILTSPFGESSARFCAACVVTALEDLHKNGVLYRGVSPDLLTLDQTGCIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHSFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAIDLITKLLDGDESTRLGSQGPDSVKSHPWFNGVDWEGIRNHSFPAPPEILSRITLYLEIHSEDCTGSQVSPSQEVDELNIPEWLEDW 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2017 1078 CDD CAP_ED 603 723 IPR000595 -
Prci1g2017 1078 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Prci1g2017 1078 PRINTS cAMP-dependent protein kinase signature 722 734 - -
Prci1g2017 1078 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Prci1g2017 1078 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Prci1g2017 1078 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Prci1g2017 1078 SUPERFAMILY cAMP-binding domain-like 442 587 IPR018490 -
Prci1g2017 1078 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 458 1039 - -
Prci1g2017 1078 ProSiteProfiles Protein kinase domain profile. 748 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2017 1078 SMART PP2C_4 83 381 IPR001932 -
Prci1g2017 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 603 743 IPR000595 -
Prci1g2017 1078 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Prci1g2017 1078 Coils Coil 796 816 - -
Prci1g2017 1078 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Prci1g2017 1078 Gene3D Transferase(Phosphotransferase) domain 1 852 1037 - -
Prci1g2017 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Prci1g2017 1078 Gene3D - 87 384 IPR036457 -
Prci1g2017 1078 SUPERFAMILY cAMP-binding domain-like 595 727 IPR018490 -
Prci1g2017 1078 SMART cnmp_10 477 600 IPR000595 -
Prci1g2017 1078 SMART cnmp_10 603 741 IPR000595 -
Prci1g2017 1078 Gene3D Jelly Rolls 450 591 IPR014710 -
Prci1g2017 1078 SMART serkin_6 774 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2017 1078 Pfam Cyclic nucleotide-binding domain 622 724 IPR000595 -
Prci1g2017 1078 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Prci1g2017 1078 CDD PP2Cc 109 383 IPR001932 -
Prci1g2017 1078 SUPERFAMILY PP2C-like 82 386 IPR036457 -
Prci1g2017 1078 Pfam Protein kinase domain 787 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2017 1078 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 451 591 - -
Prci1g2017 1078 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Prci1g2017 1078 Gene3D Jelly Rolls 592 745 IPR014710 -
Prci1g2017 1078 SUPERFAMILY Protein kinase-like (PK-like) 750 1056 IPR011009 -
Prci1g2017 1078 CDD CAP_ED 477 586 IPR000595 -
Prci1g2017 1078 Gene3D Phosphorylase Kinase; domain 1 766 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2017 Prci-Chr1 41006946 41016076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2017 1 1078 PP2C-type Phosphatase Gene Family AT2G20050 68.248 0.0 1513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Prci1g2017 Pkinase 1.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2017 - - gmx:100799821 1816.2