Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2016 ATGGGTTGCGTTTATTCAAGGGTTTGCATAGGTGAGGTTTGTAGCCCAAGAAATTCCGGGATAAATGAAGGTCGAAATGCGAAAACTAGTGAGGCTGCTTGGTTGTCTCCTGCGTCCTCGGATGTTCAGGAAGGTGAAGTTAGAGACCAATTTAATCAATTGAGCTTAACCAGAGACTCTGAAGCAGGCATCAGAAGGCTAGCTAGGGTTTCAGCGCAGTTTCTACCTCCTGATGGCTCGCGAGCAGTGAAGGTTCCTTCGGGAAACTTTGAATTGCGTTATTCGTACTTGTCACAGAGAGGTTACTACCCTGATGCTCTAGATAAGGCCAACCAAGATAGTTTTTGCATTCACACCCCATTTGGTACCCACCCTGATGATCATTTCTTTGGGGTTTTCGATGGGCACGGAGAGTTTGGGACTCAGTGTTCGCAGTTCGTGAAGCGAAAGCTATGTGAGAATTTGCTTAGAAATAGTAAATTTCGAGTAGATGCTGTGGAGGCTTGTCACGCTGCGTTCTTGGCGACAAACTCGCAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGCACTACAGCAATTACGGTATTGGTTCGGGGTAGGACAATATACGTGGCCAATTCAGGTGATTCTAGGGCGGTGATTGCAGAGAGGAGAGGAAACGATGTTGTGGCAGTAGACTTGTCCATGGATCAAACACCTTTTAGGCAAGACGAACTTGAAAGGGTCAGGCTTTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGGCTTAAGAATCCTGATGTTCAATGTTGGGGTACAGAAGAAGGAGATGATGGTGATCCGCCTAGATTGTGGGTTCCGAACGGGATGTACCCTGGTACAGCTTTCACTAGAAGCATTGGTGATTCAGTTGCCGAGACCATTGGCGTCGTTGCTACCCCAGAAATTGTTGTTTTCGAGCTCACACCAAACCATCCTTTCTTTGTGCTTGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGCCAGACTGTGGTTGAAATGGTTTCTAAATTCAAAGATCCTCGCGATGCTTGTGCTGCAATTGTGGCTGAATCTTATCGACTTTGGTTGCAATATGAAACTCGTACGGATGATATTACCATTATTGTTGTTCATATTAACGGACTAAACGATCCTGCTGTTGGTCAATCTGCCAGCTATGGTGATGTTCTTAGAACTCCAGTTCCTCAAGTTGTTGAGGTGACAGGATCAGAATCACCTTCCACCTTGGGCTGGTACTCCAAGAACCCTCGGGCAAGGCATGACTTATCAAGGGCGCGTCTCCGAGCAATTGAAAATTCCTTAGAAAATGGGCAAACTTGGATTCCTCCATCTTCTGCTCATAGGAAAACATGGGAGGAAGAAGCACAAATTGAGCGGGCATTGCACGATCATTTTCTCTTCAGAAAGCTTACCGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAAAAAAATGGGGAATTGCCTAGGGTTCTGCAGCGCTACACAGCAGAAAAATTGTCTTGTTTTGGAGAACTTGCTCTCATGTATAATAAACCACTTCAGGCTTCTGTACGTGCTGTAACTGAAGGAACTCTATGGGCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCGAAGTTCTCTAACTTATCATCTTTGAAGTTGCTTCGGTCTGTTGATCTCCTTTCAAAGTTGACAATCTTACAACTCAGTCAGATCTCAGAGTCCCTCTCTGAAGTTTCCTTTTCAAATGGACAAATAATAATTGATCAAAATGAAGCCTCTGCATTGTACATAATTCAGAAGGGACAAGTGAGAATAACTTTTGATTCAGATTTACTGAGAAACCCAAATGCCTGTAGCCTGAAGCCTGACTGTCAAAATGAGAATGATGATTTACAGAGCACGAAGGACGTATCAATAGAGAAGCCGGAGGGAAGCTATTTCGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACCTTAAGTGCTGTGGCTGTGGGTGATGTGTTATGTACTGTACTAACAAAGGAAAAATTTCAATCAGAAATTGGCCCCTTGAAAAAGTTGTCTAAGGAAGATCAGAAGTCAAGGGACAATTCATCAGACTATTTGAAGGAATCAAGTAAAAGTATTAATTTTTCTTCACTTGATAAAATCCATATCTCAGATTTGGAGTGGAAAAAGAGTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTATTAGGAGACTCAGCAGAGAATATGCTTACTTTGAAGAGGTTTTCTAAGCAAAAGGTGAAAAGGCTGGGAAAGGAAGCACAAGTTTTAAAAGAGAAAAATTTGATCAAGGGCACGAGCCCTTCGGCTTGTATACCACAGGTTCTGTGCACCTGTGCTGATCGAGTTTATGCTGGGATACTACTAAATACACGCCTTGCTTGTCCATTGTCTTCCATACTTACAAGTCCTTTTGGTGAATCATCAGCTCGATTTTGTGCTGCTTGTGTTGTTACTGCCTTGGAAGATTTACATAAGAATGGTGTTCTTTACAGAGGGGTATCACCTGATCTTCTGACTTTGGACCAAACTGGATGTATACAGCTTGTGGACTTCAGGTTTGGGAAGAAACTCTCAGATGAAAGAACATTCACAATTTGTGGAATGGCAGACTCATTAGCTCCAGAGATTGTTCTGGGAAAAGGCCACAGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTTTGATTTATTTTATGTTACGAGGTGAGATGCCTTTTGGATCGTGGAGAGAAAATGAGCTTGATACAGTGGCCAAAATTGCAAAAAGGAAGCTGAACCTTCCAGAAACTTTCAGCCCGGAGGCTATTGATCTCATCACTAAGTTACTTGATGGTGACGAAAGCACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAAAGCCATCCTTGGTTTAATGGTGTTGACTGGGAAGGGATAAGAAATCATAGCTTTCCTGCTCCTCCAGAAATTCTCTCTCGTATAACTCTATACCTGGAAATTCATTCCGAGGATTGCACCGGTTCCCAAGTTTCCCCGTCACAAGAGGTAGATGAACTTAACATTCCTGAATGGCTTGAGGACTGGTAG 3240 0.434 MGCVYSRVCIGEVCSPRNSGINEGRNAKTSEAAWLSPASSDVQEGEVRDQFNQLSLTRDSEAGIRRLARVSAQFLPPDGSRAVKVPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTHPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSKFRVDAVEACHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGNDVVAVDLSMDQTPFRQDELERVRLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSVAETIGVVATPEIVVFELTPNHPFFVLASDGVFEFLSSQTVVEMVSKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHINGLNDPAVGQSASYGDVLRTPVPQVVEVTGSESPSTLGWYSKNPRARHDLSRARLRAIENSLENGQTWIPPSSAHRKTWEEEAQIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEKNGELPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWALRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQISESLSEVSFSNGQIIIDQNEASALYIIQKGQVRITFDSDLLRNPNACSLKPDCQNENDDLQSTKDVSIEKPEGSYFGEWTLLGENIGTLSAVAVGDVLCTVLTKEKFQSEIGPLKKLSKEDQKSRDNSSDYLKESSKSINFSSLDKIHISDLEWKKSVYSTDCSEVGLTLLGDSAENMLTLKRFSKQKVKRLGKEAQVLKEKNLIKGTSPSACIPQVLCTCADRVYAGILLNTRLACPLSSILTSPFGESSARFCAACVVTALEDLHKNGVLYRGVSPDLLTLDQTGCIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHSFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAIDLITKLLDGDESTRLGSQGPDSVKSHPWFNGVDWEGIRNHSFPAPPEILSRITLYLEIHSEDCTGSQVSPSQEVDELNIPEWLEDW 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2016 1079 CDD CAP_ED 603 723 IPR000595 -
Prci1g2016 1079 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Prci1g2016 1079 SUPERFAMILY cAMP-binding domain-like 442 587 IPR018490 -
Prci1g2016 1079 Pfam Protein kinase domain 791 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2016 1079 SMART PP2C_4 83 381 IPR001932 -
Prci1g2016 1079 SUPERFAMILY cAMP-binding domain-like 595 727 IPR018490 -
Prci1g2016 1079 ProSiteProfiles cAMP/cGMP binding motif profile. 603 743 IPR000595 -
Prci1g2016 1079 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Prci1g2016 1079 SMART serkin_6 698 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2016 1079 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Prci1g2016 1079 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Prci1g2016 1079 SMART cnmp_10 477 600 IPR000595 -
Prci1g2016 1079 SMART cnmp_10 603 741 IPR000595 -
Prci1g2016 1079 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 456 1040 - -
Prci1g2016 1079 Gene3D Jelly Rolls 450 591 IPR014710 -
Prci1g2016 1079 SUPERFAMILY Protein kinase-like (PK-like) 793 1057 IPR011009 -
Prci1g2016 1079 Pfam Cyclic nucleotide-binding domain 622 724 IPR000595 -
Prci1g2016 1079 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Prci1g2016 1079 CDD PP2Cc 109 383 IPR001932 -
Prci1g2016 1079 Gene3D Phosphorylase Kinase; domain 1 789 852 - -
Prci1g2016 1079 Gene3D - 87 384 IPR036457 -
Prci1g2016 1079 Coils Coil 797 817 - -
Prci1g2016 1079 Gene3D Transferase(Phosphotransferase) domain 1 853 1038 - -
Prci1g2016 1079 SUPERFAMILY PP2C-like 82 386 IPR036457 -
Prci1g2016 1079 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Prci1g2016 1079 PRINTS cAMP-dependent protein kinase signature 722 734 - -
Prci1g2016 1079 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Prci1g2016 1079 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Prci1g2016 1079 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 451 591 - -
Prci1g2016 1079 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Prci1g2016 1079 Gene3D Jelly Rolls 592 745 IPR014710 -
Prci1g2016 1079 ProSiteProfiles Protein kinase domain profile. 748 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2016 1079 CDD CAP_ED 477 586 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2016 Prci-Chr1 41006946 41016076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2016 1 1079 PP2C-type Phosphatase Gene Family AT2G20050 68.186 0.0 1509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Prci1g2016 Pkinase 3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2016 - - gmx:100799821 1811.58