Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2015 ATGGGTTGCGTTTATTCAAGGGTTTGCATAGGTGAGGTTTGTAGCCCAAGAAATTCCGGGATAAATGAAGGTCGAAATGCGAAAACTAGTGAGGCTGCTTGGTTGTCTCCTGCGTCCTCGGATGTTCAGGAAGGTGAAGTTAGAGACCAATTTAATCAATTGAGCTTAACCAGAGACTCTGAAGCAGGCATCAGAAGGCTAGCTAGGGTTTCAGCGCAGTTTCTACCTCCTGATGGCTCGCGAGCAGTGAAGGTTCCTTCGGGAAACTTTGAATTGCGTTATTCGTACTTGTCACAGAGAGGTTACTACCCTGATGCTCTAGATAAGGCCAACCAAGATAGTTTTTGCATTCACACCCCATTTGGTACCCACCCTGATGATCATTTCTTTGGGGTTTTCGATGGGCACGGAGAGTTTGGGACTCAGTGTTCGCAGTTCGTGAAGCGAAAGCTATGTGAGAATTTGCTTAGAAATAGTAAATTTCGAGTAGATGCTGTGGAGGCTTGTCACGCTGCGTTCTTGGCGACAAACTCGCAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGCACTACAGCAATTACGGTATTGGTTCGGGGTAGGACAATATACGTGGCCAATTCAGGTGATTCTAGGGCGGTGATTGCAGAGAGGAGAGGAAACGATGTTGTGGCAGTAGACTTGTCCATGGATCAAACACCTTTTAGGCAAGACGAACTTGAAAGGGTCAGGCTTTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGGCTTAAGAATCCTGATGTTCAATGTTGGGGTACAGAAGAAGGAGATGATGGTGATCCGCCTAGATTGTGGGTTCCGAACGGGATGTACCCTGGTACAGCTTTCACTAGAAGCATTGGTGATTCAGTTGCCGAGACCATTGGCGTCGTTGCTACCCCAGAAATTGTTGTTTTCGAGCTCACACCAAACCATCCTTTCTTTGTGCTTGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGCCAGACTGTGGTTGAAATGGTTTCTAAATTCAAAGATCCTCGCGATGCTTGTGCTGCAATTGTGGCTGAATCTTATCGACTTTGGTTGCAATATGAAACTCGTACGGATGATATTACCATTATTGTTGTTCATATTAACGGACTAAACGATCCTGCTGTTGGTCAATCTGCCAGCTATGGTGATGTTCTTAGAACTCCAGTTCCTCAAGTTGTTGAGGTGACAGGATCAGAATCACCTTCCACCTTGGGCTGGTACTCCAAGAACCCTCGGGCAAGGCATGACTTATCAAGGGCGCGTCTCCGAGCAATTGAAAATTCCTTAGAAAATGGGCAAACTTGGATTCCTCCATCTTCTGCTCATAGGAAAACATGGGAGGAAGAAGCACAAATTGAGCGGGCATTGCACGATCATTTTCTCTTCAGAAAGCTTACCGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAAAAAAATGGGGAATTGCCTAGGGTTCTGCAGCGCTACACAGCAGAAAAATTGTCTTGTTTTGGAGAACTTGCTCTCATGTATAATAAACCACTTCAGGCTTCTGTACGTGCTGTAACTGAAGGAACTCTATGGGCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCGAAGTTCTCTAACTTATCATCTTTGAAGTTGCTTCGGTCTGTTGATCTCCTTTCAAAGTTGACAATCTTACAACTCAGTCAGATCTCAGAGTCCCTCTCTGAAGTTTCCTTTTCAAATGGACAAATAATAATTGATCAAAGCACGAAGGACGTATCAATAGAGAAGCCGGAGGGAAGCTATTTCGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACCTTAAGTGCTGTGGCTGTGGGTGATGTGTTATGTACTGTACTAACAAAGGAAAAATTTCAATCAGAAATTGGCCCCTTGAAAAAGTTGTCTAAGGAAGATCAGAAGTCAAGGGACAATTCATCAGACTATTTGAAGGAATCAAGTAAAAGTATTAATTTTTCTTCACTTGATAAAATCCATATCTCAGATTTGGAGTGGAAAAAGAGTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTATTAGGAGACTCAGCAGAGAATATGCTTACTTTGAAGAGGTTTTCTAAGCAAAAGGTGAAAAGGCTGGGAAAGGAAGCACAAGTTTTAAAAGAGAAAAATTTGATCAAGGGCACGAGCCCTTCGGCTTGTATACCACAGGTTCTGTGCACCTGTGCTGATCGAGTTTATGCTGGGATACTACTAAATACACGCCTTGCTTGTCCATTGTCTTCCATACTTACAAGTCCTTTTGGTGAATCATCAGCTCGATTTTGTGCTGCTTGTGTTGTTACTGCCTTGGAAGATTTACATAAGAATGGTGTTCTTTACAGAGGGGTATCACCTGATCTTCTGACTTTGGACCAAACTGGATGTATACAGCTTGTGGACTTCAGGTTTGGGAAGAAACTCTCAGATGAAAGAACATTCACAATTTGTGGAATGGCAGACTCATTAGCTCCAGAGATTGTTCTGGGAAAAGGCCACAGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTTTGATTTATTTTATGTTACGAGGTGAGATGCCTTTTGGATCGTGGAGAGAAAATGAGCTTGATACAGTGGCCAAAATTGCAAAAAGGAAGCTGAACCTTCCAGAAACTTTCAGCCCGGAGGCTATTGATCTCATCACTAAGTTACTTGATGGTGACGAAAGCACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAAAGCCATCCTTGGTTTAATGGTGTTGACTGGGAAGGGATAAGAAATCATAGCTTTCCTGCTCCTCCAGAAATTCTCTCTCGTATAACTCTATACCTGGAAATTCATTCCGAGGATTGCACCGGTTCCCAAGTTTCCCCGTCACAAGAGGTAGATGAACTTAACATTCCTGAATGGCTTGAGGACTGGTAG 3111 0.4362 MGCVYSRVCIGEVCSPRNSGINEGRNAKTSEAAWLSPASSDVQEGEVRDQFNQLSLTRDSEAGIRRLARVSAQFLPPDGSRAVKVPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTHPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSKFRVDAVEACHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGNDVVAVDLSMDQTPFRQDELERVRLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSVAETIGVVATPEIVVFELTPNHPFFVLASDGVFEFLSSQTVVEMVSKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHINGLNDPAVGQSASYGDVLRTPVPQVVEVTGSESPSTLGWYSKNPRARHDLSRARLRAIENSLENGQTWIPPSSAHRKTWEEEAQIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEKNGELPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWALRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQISESLSEVSFSNGQIIIDQSTKDVSIEKPEGSYFGEWTLLGENIGTLSAVAVGDVLCTVLTKEKFQSEIGPLKKLSKEDQKSRDNSSDYLKESSKSINFSSLDKIHISDLEWKKSVYSTDCSEVGLTLLGDSAENMLTLKRFSKQKVKRLGKEAQVLKEKNLIKGTSPSACIPQVLCTCADRVYAGILLNTRLACPLSSILTSPFGESSARFCAACVVTALEDLHKNGVLYRGVSPDLLTLDQTGCIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHSFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAIDLITKLLDGDESTRLGSQGPDSVKSHPWFNGVDWEGIRNHSFPAPPEILSRITLYLEIHSEDCTGSQVSPSQEVDELNIPEWLEDW 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2015 1036 SMART serkin_6 655 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2015 1036 Gene3D Jelly Rolls 451 593 IPR014710 -
Prci1g2015 1036 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Prci1g2015 1036 SMART PP2C_4 83 381 IPR001932 -
Prci1g2015 1036 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 457 997 - -
Prci1g2015 1036 Gene3D Phosphorylase Kinase; domain 1 746 809 - -
Prci1g2015 1036 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Prci1g2015 1036 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Prci1g2015 1036 SUPERFAMILY PP2C-like 82 386 IPR036457 -
Prci1g2015 1036 Gene3D Jelly Rolls 594 707 IPR014710 -
Prci1g2015 1036 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Prci1g2015 1036 SUPERFAMILY cAMP-binding domain-like 595 684 IPR018490 -
Prci1g2015 1036 Gene3D - 87 384 IPR036457 -
Prci1g2015 1036 CDD PP2Cc 109 383 IPR001932 -
Prci1g2015 1036 SUPERFAMILY cAMP-binding domain-like 442 587 IPR018490 -
Prci1g2015 1036 ProSiteProfiles cAMP/cGMP binding motif profile. 644 700 IPR000595 -
Prci1g2015 1036 SUPERFAMILY Protein kinase-like (PK-like) 750 1014 IPR011009 -
Prci1g2015 1036 Gene3D Transferase(Phosphotransferase) domain 1 810 995 - -
Prci1g2015 1036 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Prci1g2015 1036 SMART cnmp_10 477 600 IPR000595 -
Prci1g2015 1036 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 451 591 - -
Prci1g2015 1036 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Prci1g2015 1036 PRINTS cAMP-dependent protein kinase signature 679 691 - -
Prci1g2015 1036 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Prci1g2015 1036 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Prci1g2015 1036 ProSiteProfiles Protein kinase domain profile. 705 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2015 1036 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Prci1g2015 1036 Pfam Protein kinase domain 748 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2015 1036 Coils Coil 754 774 - -
Prci1g2015 1036 CDD CAP_ED 477 586 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2015 Prci-Chr1 41006945 41016076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2015 1 1036 PP2C-type Phosphatase Gene Family AT2G20050 66.727 0.0 1460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Prci1g2015 Pkinase 2.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2015 - - gmx:100799821 1735.31