Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2010 ATGGAGCGGATTGTAGGCTGCAAGTATAAGCTTGGCCGCAAGATCGGAAGCGGATCCTTCGGTGAAATTTATCTGGCTACGCATATTGACACTTTCGAGATCGTCGCTGTCAAGATCGAGAACAGTAAAACAAAGCATCCGCAGTTGCTTTACGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGCATTCCTAGCATAAAATGGTCTGGCCTGGATGGGGAGGAGAATGTGCTTGTTCTTGATTTACTGGGACCGAGTCTTGAGGATTTGTTTGTGTATTGTGGAAGGAAGTTTTCATTGAAGACAGTCTTAATGCTGGCTGATCAAATGATAACTAGAATAGAATATGTGCATTCCAAGGGATTTTTACATCGGGATATAAAACCCGATAACTTTCTTATGGGACTTGGTCGGAAGGCTAACCAGGTTTACATAATTGATTTTGGTCTTGCAAAGAGGTATCGGGACTCCACAACCAATCGCCACATCCCTTATAGGGAGAACAAAAATTTAACGGGGACTGCACGTTATGCAAGTTGCAATACTCATCTAGGGATTGAACAAAGCCGACGGGATGATTTGGAGTCACTGGGTTATGTTCTTCTGTACTTCCTGAGAGGAAGTCTTCCTTGGCAAGGTCTGAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAATTGTCAACTCCAATTGAGGTCCTCTGCAAGTCTCATCCTGTAGAGTTTGCTTCATACTTTCACTACTGCCACTCTCTGACTTTTGACCAGCGGCCTGATTATGGGTTCTTGAAGCGTGTATTTCGGGAACTATTCACTCGAGAAGGATATGAATTTGACTATGTATTTGATTGGACCATCTTGAAGTATCAGCAGGCACAAAAGAACAAATCTCAGCCACGCATACCCCCTGTTACTGGAGCAAGCAACAGTCGTGTGACGCCAATGGATGTTGACAACCATCATGTTGATGTATCAGATCGCATTAGATCAGGCAATGCTACCAGTTCCGGTGTTAAATTGCAGTTTAAATCACCAATTGGCAAAAATTTAAGTTCTGAACATCCTTTTAAGAAGAATATTTTTGGAGAGGAGAACATGCCCTCTACTTCATATTCACTTTCTGGTACCTCCAAGAGGGACTTCTTGAAGCCCATCATGCCTTCTGAAGCTGCTAATTCTGGACAGGAACATGTTAGTAAAATTGGCCCTTCTAGCAGCTGGATTTCATCTCTGCATCGCACCAAATGA 1266 0.4273 MERIVGCKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPSIKWSGLDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRELFTREGYEFDYVFDWTILKYQQAQKNKSQPRIPPVTGASNSRVTPMDVDNHHVDVSDRIRSGNATSSGVKLQFKSPIGKNLSSEHPFKKNIFGEENMPSTSYSLSGTSKRDFLKPIMPSEAANSGQEHVSKIGPSSSWISSLHRTK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2010 421 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2010 421 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Prci1g2010 421 PANTHER CASEIN KINASE-RELATED 13 321 - -
Prci1g2010 421 Gene3D Transferase(Phosphotransferase) domain 1 1 332 - -
Prci1g2010 421 CDD STKc_CK1_delta_epsilon 8 282 - -
Prci1g2010 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Prci1g2010 421 MobiDBLite consensus disorder prediction 303 322 - -
Prci1g2010 421 MobiDBLite consensus disorder prediction 390 421 - -
Prci1g2010 421 MobiDBLite consensus disorder prediction 398 421 - -
Prci1g2010 421 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2010 421 FunFam Casein kinase I isoform delta-like 1 340 - -
Prci1g2010 421 MobiDBLite consensus disorder prediction 303 321 - -
Prci1g2010 421 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2010 421 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2010 Prci-Chr1 40937790 40942423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2010 4 236 AGC Kinase Gene Family AT3G08720 25.630 1.72e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Prci1g2010 Pkinase 6.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2010 K08960 - gmx:100800342 733.406