Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2003 ATGAATAGAGGTCATCTTCTTCATCAGAGCTCACCGGTGCAGCAAATGATGGCCAACCCTAACTGGTGGAACATCAATATTAATACCATGCGCCCTCAACAACCTTCTCCTTTCTTGTCCTCTCCTTCCAATTTTCTACCCAATCAACACCTGCCTTCTTGGCAACATGACCTCAATAATCAACACCACTTTCCAGACTCATGGACCCAACTTCTCATGGGTGGATCGATGGCTGAAGAAGATAGAGGAGGCATGGGTCAGTTTCAGGCACCGAATGCAGCTCTCGTGGATATTAAGCAAGAAAGTTCAGTGAACAGCTATGGTTATGGCCATGGAAACAGCGAAGAATTTCAGGCAGTGAAACCTACTGGTTGGCCTCATCAAATAGTTGTGCCGGCTTCTTCTCCAAAGTCCTGTGTCACAAGTTTCAGCAGCAATATGTTGGATTTCTCTAACAATCAAGCCGATGCTAAGCCGTCTCTGCCAGATCCATCTTCTGAGTGTAACAGCAGTGCAACTACTGGTGGGGCAGCGAAGAAGGCTAGGGTTCAAGGCTCTGGAGCTCAGTCTACCTTCAAGGTTAGGAAGGAGAAGCTGGGTGACAGAATCACAGCCCTTCATCAGCTAGTTTCTCCATTCGGAAAGACTGACACGGCCTCTGTGCTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATCGAGGTCCTTAGCTTACCATACTTGGGCAGTGCCACATCATCAAGCCTCAGGCACCAACAATCTGCTGTTCAAGGAGAGAATAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACAGCTTGAAGAGGAAAGCGCCTTGTAGTAATCCGCAGGAATCAAAAGAAGAAGGGAAGAAGGACCTGAGAAGTAGAGGATTGTGTCTGGTTCCAGTGTCGTGCACAATGCAAGTTGGGAGTGATAATGGAGCAGACTATTGGGCTCCTGCACTAGGCGCAGGGTTTCGATAG 1005 0.4746 MNRGHLLHQSSPVQQMMANPNWWNININTMRPQQPSPFLSSPSNFLPNQHLPSWQHDLNNQHHFPDSWTQLLMGGSMAEEDRGGMGQFQAPNAALVDIKQESSVNSYGYGHGNSEEFQAVKPTGWPHQIVVPASSPKSCVTSFSSNMLDFSNNQADAKPSLPDPSSECNSSATTGGAAKKARVQGSGAQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEVLSLPYLGSATSSSLRHQQSAVQGENNCIFPEDPGQLLNENSLKRKAPCSNPQESKEEGKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPALGAGFR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2003 334 MobiDBLite consensus disorder prediction 154 184 - -
Prci1g2003 334 Gene3D - 190 256 IPR036638 GO:0046983
Prci1g2003 334 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 46 316 - -
Prci1g2003 334 CDD bHLH_AtbHLH_like 191 240 IPR045239 -
Prci1g2003 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Prci1g2003 334 MobiDBLite consensus disorder prediction 274 298 - -
Prci1g2003 334 FunFam Transcription factor bHLH123 family 193 257 - -
Prci1g2003 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 243 IPR036638 GO:0046983
Prci1g2003 334 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2003 Prci-Chr1 40843854 40847739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2003 96 274 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 51.579 1.24e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2003 - - gmx:100785156 452.595