Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1992 ATGGGAGAAGGTGACGGGGGTGATTGCCCTGTGAAGAATGTGTTATCGGATTCTGTTGCCGTGGTGCTGCCGTTGGATGGTCCAGGGAAGAAGCTAGCGAGGCAGCTCGATTTTACGGGTTTTGGTGGGGTATCTGGTACTGTGGCTTCAAGCGAACATCCGCAATTACAACTGCAGCCTCAGCCACGTCCACAGTCAGTGCCTCGGGGACTGACACAGCAAACCATGGTCGTGATGCCAGTGCCGCCGCAGGTACCTCATTCTTCAGTAAGGGTTGGGAAACCAGAATCTCCAAAGTCAAGATCAAGACCTAACTTTGAAACGAAAGACTCTACTCCAAAGAAGCAAAAACAGTGCAATTGTAAACACTCAAGATGCTTAAAGCTATATTGCGAATGTTTTGCATCAGGAATATATTGTGAGGGGTGCAACTGTGTAAATTGTTTTAACAATGTGGAGAATGATGCGGCGAGACGGGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCTAGCAGCCCTCATGGAACACGTAATAGCAAGGAGGAGACCGGAGAAGTTTTAGTATTGGGAAAGCACAACAAGGGCTGCCACTGTAAAAAATCAGGATGCCTTAAAAAGTATTGTGAATGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCTTTGACTGCAAAAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTATTCCATGGAGATCAAAATAACAATATAACATATATTCAGCAGGCAGCTAACGCTGCCATAACTGGAGCTATTGGAACCTCTGGTTATTCATCCCCTCCAATATCCAAGAAAAGAAAAGGTCAGGAGCCTTTTTTTGGGCCAACAGTCAAGGATCCATCTGTTGGCAGGCTTGGGCAGTTTCAACAGGCAAACAATGTCGGAGTTCCTACACCTTCTTCTTCCTTGTCTTCTGTCCCTGGTGCCTGGGTTGGAGGTGCTGCAGTAGGTCCTTCAAAATTCGCATACAGGTCTCTTCTAGCAGACATCATACATCCACAGCACTTGAAGGAACTTTGCTCTGTTCTGGTGTTAGTATCGGGACAAGCTGCAAAGACACTCTCAGGACCAGATCAGAAAACTTTATTGGACAAGCAGCGTATTGAAGATCAGACAGAGACTGCCCTTGCTTCATCTACTCAACAGCAATTGCTGAGTCAAGTGGAGACTGATGTCGAGAAAACTATGGCTGATGATTGTTTGAGTGCAAACCAGACAGATAAAATTGACCCAGATTATTCCAGTTCAGATGGCGCTGATGTCTCAAAGGGGAGGCCAATGTCTCCTGGAACTCTAGCCTTGATGTGCGATGAGCGAGATGCAATGTTCATGACAGCTCCCTCTCCTAATAGTTTGATGATGACCCATGACTGCAGCGCATCTTCACAGTCTGCTTGTGGACAAGGCATGACAGAGGTGCATGCAGAGCAAGAAAGGATTGTATTGACAAAGTTCAGAGATTTTCTAAATAGGGTTATCACTATGGGAGAAATAAATGAGACAAAGTGTTCTTCATTAGCTAGAAGTGTATTGGAGACTCAAAAGGACCCAGTCAACAATAATGTCGGGAATACAAGTACTAAGACAACACATCATCAGCAGATTGCCACTAGTAATGGTGTTGCCAAAGCTGCAGTCCCACCCATGGCCACAAACATGAACATAATAACTTCGACAGCTTTAATCCCTAATAATCTTATTCCCGATGGGGAAAATAAGCCAAAGATCGAAAAAGAGATATGA 1797 0.4469 MGEGDGGDCPVKNVLSDSVAVVLPLDGPGKKLARQLDFTGFGGVSGTVASSEHPQLQLQPQPRPQSVPRGLTQQTMVVMPVPPQVPHSSVRVGKPESPKSRSRPNFETKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCEGCNCVNCFNNVENDAARREAVEATLERNPNAFRPKIASSPHGTRNSKEETGEVLVLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCFDCKNFEGSEERQALFHGDQNNNITYIQQAANAAITGAIGTSGYSSPPISKKRKGQEPFFGPTVKDPSVGRLGQFQQANNVGVPTPSSSLSSVPGAWVGGAAVGPSKFAYRSLLADIIHPQHLKELCSVLVLVSGQAAKTLSGPDQKTLLDKQRIEDQTETALASSTQQQLLSQVETDVEKTMADDCLSANQTDKIDPDYSSSDGADVSKGRPMSPGTLALMCDERDAMFMTAPSPNSLMMTHDCSASSQSACGQGMTEVHAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSVLETQKDPVNNNVGNTSTKTTHHQQIATSNGVAKAAVPPMATNMNIITSTALIPNNLIPDGENKPKIEKEI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1992 598 MobiDBLite consensus disorder prediction 44 68 - -
Prci1g1992 598 MobiDBLite consensus disorder prediction 94 117 - -
Prci1g1992 598 MobiDBLite consensus disorder prediction 81 117 - -
Prci1g1992 598 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Prci1g1992 598 MobiDBLite consensus disorder prediction 43 68 - -
Prci1g1992 598 MobiDBLite consensus disorder prediction 534 560 - -
Prci1g1992 598 MobiDBLite consensus disorder prediction 421 444 - -
Prci1g1992 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Prci1g1992 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Prci1g1992 598 SMART CXC_2 114 154 IPR033467 -
Prci1g1992 598 SMART CXC_2 199 240 IPR033467 -
Prci1g1992 598 MobiDBLite consensus disorder prediction 534 558 - -
Prci1g1992 598 PANTHER TESMIN/TSO1-RELATED 55 516 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1992 Prci-Chr1 40771660 40787807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1992 1 566 CPP Transcription Factor Family AT4G29000 53.130 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Prci1g1992 TCR 5.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1992 - - qsa:O6P43_007909 811.986