Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1977 ATGTCGGCGTCCCCGTCTCCCGGAGCTGCTCCTGCCCCCACATCGCCGCCGGCAAATAACACAACTCCTCCTCCTCCTCCTCCGTCCAATAACAGTACCTCTACTCCTCCACCTCCTGCCAACTCTACTGCACCACCTCCTGCTAGTCCTTCGCCTCCGCCTTCAGCCACGCCCACTCCCAGCCCTCCGTCTCCTTCGCCGCCACCGCCGCCTCCTTCTAGTACCAATTCTCCACCGCCTCCCGTGACTCGGACCTCCCCTCCTCCTCCTTCCAGTTCAGGCACGCCTTCAACTCCGGCTGGAAGCCCGCCGCCTCCGCCTTCATCCCCTTCTTCATCGTCGACTATATCCACTGGTGTTGTTGTTGGAATCGCCCTTGGTGCTGTAGCGATTCTTCTAATTTTAAGCTTTGTATGCGTATGTTGTTTGAGGAAGAAGAAGAGAACAAGTAATGCGGGATACTATCCGCCACCGCGGGGACCAAAAGGTGACCAATATGGTGGCCCACCCCATCAGTGGCAACATAATGCTCCCCCTCCTTCAGATAATGTTGTCTCCGTGATGCAAAAGCCCCCGCCCCCGCCCCCAGGTGCATCACGACCACCCCAATTACCAGCTTATGCCCCTAAACCTTCTCCGCCGCCACCATTCCTGAGCAGCAGTAGTGGGTCTGGTTCCAATTATTCAGGTGGCGAAAATCCATTCCCGCCCCCTTCGCCTGGTATTGCATTGGGTTTCTCAAAGAGCACATTTACATACGAAGAGTTGATACGGGCAACAGATGGATTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTACACAAAGGAATCCTGCCGAACGGGAAGGAGGTGGCAATCAAGCAGCTAAAGGCAGGAAGTGGGCAGGGAGAACGAGAATTTCAAGCAGAAGTTGAGATCATCAGCCGAGTTCATCACAGGCATCTTGTTTCTCTGGTTGGATACTGCATCACTGGACAGCAGAGATTGCTTGTTTATGAATTTGTTCCAAACAATACGTTGGAACTTCACTTACATGGAAAAGGGCGACCTACTATGGATTGGCCCACGAGACTGAAAATTGCCTTGGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCAAAGATCATCCATCGAGATATCAAAGCTGCTAATATACTTCTGGATTTCAAGTTTGAAGCGAAGGTTGCTGATTTTGGACTAGCAAAGTTTTCTTCTGATGTCAATACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCGTTTGGGGTCATGCTCCTGGAGCTAATTACTGGACATCGACCGGTTGACACAACTCATACTTTCATGGAGGATAGTCTGGTAGAATGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGATCATAATTTTGATTCGCTTGTTGATCCAAGGCTCAAAGATGAATATGACCCCAATGAAATGACTCGCATGGTTGCATGTGCAGCAGCCTGCACCCGTCATTCAGCACGTCATAGGCCAAAAGTGAGCCAGGTTGTTCGTGCTCTGGAAGGTGACATGTCTCTATCAGATCTTAACGAAGGAATTAAACCTGGACACAGCTCTGTCTACAGTTTCCGAGGAAGCTCTGATTATGACACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTGGGAACCCAGGAGCTTGGCGGGAGCAGTGAATACAGTGCACCTACGAGTGACAACAGCTTATTCCCATCTGGCTCCAGCAGTGAAGGCCAGAGCCGTCAGACCACCCGGGAAATGGAAGTGAGAAAGACGAATAACCACCAAGAAGGTTACAGTGGAAGCTCTTGA 1911 0.5039 MSASPSPGAAPAPTSPPANNTTPPPPPPSNNSTSTPPPPANSTAPPPASPSPPPSATPTPSPPSPSPPPPPPSSTNSPPPPVTRTSPPPPSSSGTPSTPAGSPPPPPSSPSSSSTISTGVVVGIALGAVAILLILSFVCVCCLRKKKRTSNAGYYPPPRGPKGDQYGGPPHQWQHNAPPPSDNVVSVMQKPPPPPPGASRPPQLPAYAPKPSPPPPFLSSSSGSGSNYSGGENPFPPPSPGIALGFSKSTFTYEELIRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGQQRLLVYEFVPNNTLELHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGHRPVDTTHTFMEDSLVEWARPLLIRALEDHNFDSLVDPRLKDEYDPNEMTRMVACAAACTRHSARHRPKVSQVVRALEGDMSLSDLNEGIKPGHSSVYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGGSSEYSAPTSDNSLFPSGSSSEGQSRQTTREMEVRKTNNHQEGYSGSS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1977 636 MobiDBLite consensus disorder prediction 185 218 - -
Prci1g1977 636 Pfam Protein tyrosine and serine/threonine kinase 268 536 IPR001245 GO:0004672|GO:0006468
Prci1g1977 636 SMART serkin_6 263 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1977 636 Gene3D Phosphorylase Kinase; domain 1 243 338 - -
Prci1g1977 636 FunFam Proline-rich receptor-like protein kinase PERK1 339 547 - -
Prci1g1977 636 MobiDBLite consensus disorder prediction 1 116 - -
Prci1g1977 636 MobiDBLite consensus disorder prediction 150 241 - -
Prci1g1977 636 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Prci1g1977 636 SUPERFAMILY Protein kinase-like (PK-like) 238 536 IPR011009 -
Prci1g1977 636 FunFam proline-rich receptor-like protein kinase PERK1 241 338 - -
Prci1g1977 636 MobiDBLite consensus disorder prediction 9 111 - -
Prci1g1977 636 MobiDBLite consensus disorder prediction 588 615 - -
Prci1g1977 636 Gene3D Transferase(Phosphotransferase) domain 1 339 547 - -
Prci1g1977 636 PRINTS Proline rich extensin signature 20 36 - -
Prci1g1977 636 PRINTS Proline rich extensin signature 5 17 - -
Prci1g1977 636 PRINTS Proline rich extensin signature 43 55 - -
Prci1g1977 636 PRINTS Proline rich extensin signature 60 81 - -
Prci1g1977 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Prci1g1977 636 ProSiteProfiles Protein kinase domain profile. 263 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1977 636 MobiDBLite consensus disorder prediction 588 636 - -
Prci1g1977 636 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 128 600 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1977 Prci-Chr1 40689666 40694150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1977 73 618 Trihelix Transcription Factor Family AT1G70460 50.091 6.84e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci1g1977 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1977 - - gmx:100781944 803.127