Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1961 ATGGCGTCTCTCTTTAACTGCCACGCCTCAAACCCTGATGCTGCGTCCATCAAGATCAAGTTCACGCAGCTCTTCATCAACGGACAATTCGTTGATTCTGTTTCAGGGGGCAGATTCGAGACGATAGATCCTAGAACAGGGGAGGTGATCGGCAGCATCGCCGAAGCCACCAAAGCTGACGTGGACGTCGCCGTTAAAGCTGCCCGTCAAGCCTTTGACTTCGGTCCCTGGCCTCGCTTCCCCGGCTCTGAGAGAGGAAGAATATTGATGGAATGGGCAGATTTGATAGATCAACATGCAGAAGAACTGGCAGCACTTGACGCCATAGACGCGGGAAAGCTGTACGAGTGGTGTAAGATTGAGATTCCTTCAGTGGCAAATATGCTGCGTTACTATGCAGGTGCTGCTGATAAAATCCATGGAGAGGTGTTGAAGATGTCGAGAGAGTTCCACGCCTACACTCTGCTCGAACCCGTTGGCGTCGTGGGTCACATCATTCCCTGGAACTTCCCTAGCACCATGTTCTTCAGCAAGGTCAGCCCTTCCTTGGCCGCCGGCTGCACCATGGTCGTCAAACCCGCCGAGCAAACTCCTCTCTCCGCTCTCTTCTACGCTCATCTAGCTAAGCTGGCTGGGATACCAGATGGTGTGCTTAATGTGGTACCTGGGTTTGGCCCAATTGCTGGTGCTGCTATAACCTCGCACATGGACATTGATAAGGTTAGCTTTACTGGTTCGACCCAAGTAGGACGGGAAGTGATGCAGGCTGCAGCTAGGAGTAATTTGAAGCAAGTTTCGCTTGAATTAGGAGGCAAATCACCTGTCATTATATTTGACGACGCTGATGTGGACAAAGCAGTTGAGCTTGCGCTCGTTGGAATCCTTTTTAACAAGGGAGAAATCTGCGCTGCAGGCTCTCGTGTGTTTGTTCAAGAAGGCATATACGATGAATTTGAGAAGAAATTGGTGGAGAAGGCAAAAGCTTGGGTAGTTGGAGACCCTTTTGATCCTAAAGTTCAGCAAGGTCCTCAGGTAGACAAGAAGCAATTTGAAAAGATTTTATCATACATAGAGCATGGAAAGAGAGAAGGAGCCACCTTGTTGACAGGAGGTAAGGCAGTTGGCAATCAGGGATACTACTTAGAGCCTACAGTTTTCACTAATGTTAAGGAGGACATGCTTATAGCGCAGGATGAAATATTTGGGCCTGTGATGGCACTAATGAAGTTTAAAACGATAGAGGAAGTGATAAAGAGTGCAAACAACACAAAATATGGGCTAGCAGCAGGCATAGTGACGAAGGACATTGACATAGCAAACACAGTGTCGAGATCCATCAGAGCAGGAATCATTTGGATCAATTGCTACCTTGCGTTTGGGAACGATGTTCCTTTTGGAGGGTACAAGATGAGCGGATTTGGGAAAGATTGTGGAATGGAAGCAATTCACAAGTACCTGCAAGTTAAATCTGTGGTCACTCCTATTTACAATTCTCCTTGGCTCTGA 1506 0.4788 MASLFNCHASNPDAASIKIKFTQLFINGQFVDSVSGGRFETIDPRTGEVIGSIAEATKADVDVAVKAARQAFDFGPWPRFPGSERGRILMEWADLIDQHAEELAALDAIDAGKLYEWCKIEIPSVANMLRYYAGAADKIHGEVLKMSREFHAYTLLEPVGVVGHIIPWNFPSTMFFSKVSPSLAAGCTMVVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPIAGAAITSHMDIDKVSFTGSTQVGREVMQAAARSNLKQVSLELGGKSPVIIFDDADVDKAVELALVGILFNKGEICAAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKAVGNQGYYLEPTVFTNVKEDMLIAQDEIFGPVMALMKFKTIEEVIKSANNTKYGLAAGIVTKDIDIANTVSRSIRAGIIWINCYLAFGNDVPFGGYKMSGFGKDCGMEAIHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1961 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Prci1g1961 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 489 IPR016162 GO:0016491
Prci1g1961 501 SUPERFAMILY ALDH-like 18 497 IPR016161 GO:0016491
Prci1g1961 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Prci1g1961 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Prci1g1961 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 291 - -
Prci1g1961 501 Pfam Aldehyde dehydrogenase family 31 491 IPR015590 GO:0016491
Prci1g1961 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 491 - -
Prci1g1961 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Prci1g1961 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1961 Prci-Chr1 40491373 40500305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1961 18 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.370 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1961 K12355 - gmx:100783920 844.343