Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1957 ATGGGGGACACTATTCATCAGGGGGACGAGCCAGCAGTGAACTTGTCCGACTCGAGAGGATTCTTCAGCAAATTCAAAGCGGGATTGAAAGAAACGTTCTTCCCGGACGATCCGTTCAGGCAGTTCAGGAACGAAAACAGAGGTCGCCGGAGAGCCCTCAAAGGCTTGCAGTACTTCATTCCCATCTTCGAGTGGCTTCCCAAGTACTCTTTCCGTCTCTTATTCTCCGACCTCCTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAGGGCATTAGCTACGCCAAACTCGCCTCCATCCCCCCCATCGTCGGTCTCTATTCGGCGTTCGTTCCACCCATTGTATACGCTGTTTTCGGGAGCTCGAGGCACGTGGCGGTGGGGCCGATCGCGTCATGCTCGTTGATTATATATGAGAGCATTTCAGGAGTCGTGAATCCAGACACCGACCCCGTGTTGTATCTTCATTTGGTTTACACGTCCGCCTTTATCACTGGTGTGTTCCAGGCTGCTTTAGGGGTTTTAAGGCTTGGGATATTGGTGGATTTCTTTTCGCATTCAACTATTACTGGATTCATGACTGGGACGGCCATCATTCTGATATTCCAGCAATTGAAGGGCTTGTTTGGCCTCCGACATTTCACCACTAAAACCAACGTCCAAGGTGTTATCCGCGCTATCTGGCAGTACAGATCCGAGATAAGGTGGGAGACTACTGTTCTTGGTCTGGTCCTTCTTATTTTCTTGCAGTTCACTAGATTCGTGAAGTACAAAAATCCAAAACTCTTTTGGGTACCGGCTCTGGGTCCAATCATAACGGTCGTGGTCTCTGGAGTTTTCACTTTCCTTGTTAAAGGCGAAAATCATGGAATTCAAATTGTGGGTCATCTGGATAAAGGAATCAATCCTCTCTCCATCCACTTGTTAAACTTCGACTCTAAGTATATATCACCGGTGCTGAAAGCTGCCTTAATCACAGGCATTTTGTCCTTGGCGGAAGGGATAGCAATAGGAAGGAGCTTTGCTGTGATAGATAACACACCTCATGATGGAAACAAGGAGATGATAGCATTTGGGCTGATGAACCTGTGCGGTTCTTTCACTTCATGCTACTTGACAAGTGGACCATTTTCCAAGACTGCGGTGAATTACAACGCGGGTTGTAAGACAGCATTTTCAAACATAGTACAGTCAGTTCTAATCGCACTAACACTTCAATTCCTAGCTCCTCTCTTCGGTTACACTCCTCTGGTGGCTCTAGCTGTGATCATTATTTCTGCAATGATTGGCCTCTTGGACTACCGCGAGATGATTCATCTCTTCAAAGTCGACAAGTTTGACTTCGTCATTTGCATGGCTGGCGTGCTTGGGGTCGCCTTTATAAGCATGGACGTTGGTCTCGCAATGTCCGTGGGGCTTGCTCTGTTGAGAGCTCTCTTGTATGTGGCCCGACCCGCGACTTGTAAACTGGGAAGGTTAACTGATTCGGGTCTGTATCGCGATGTGGAGCAGTATCCAAAGTCATCAAACGTCCACGGCATTCTGATTGTACAACTTGGTTCTCCTCTTTACTATGCGAACTCCAATTATATCAAAGAAAGGGTTTTGAGACACATCCGAAGTGAGCAGGCCTCTGGAGATTCCGTTGAGAATCTCATTCTCGATTTTTCAGGAGTGACATCAATTGATATGACTGGTATCAAAGGATTGTTGGAGCTTCGTAGAGTGTTGGATAAAAATGAAATACAGATATCGATAGTGAATCCAAGAAGGGAGGTGGTAGAAAGGTTAATGGTTTCTAACTTTGTAGACGCCATGGGGAAGGATTCTTTCTTTTTGACTTTAGATGAGGCAGTGATGGCAACTCAATATTCTCTCCGAAAAGGATCCAGAAAACCTGACACAATTATCTGA 1917 0.4679 MGDTIHQGDEPAVNLSDSRGFFSKFKAGLKETFFPDDPFRQFRNENRGRRRALKGLQYFIPIFEWLPKYSFRLLFSDLLAGLTITSLAIPQGISYAKLASIPPIVGLYSAFVPPIVYAVFGSSRHVAVGPIASCSLIIYESISGVVNPDTDPVLYLHLVYTSAFITGVFQAALGVLRLGILVDFFSHSTITGFMTGTAIILIFQQLKGLFGLRHFTTKTNVQGVIRAIWQYRSEIRWETTVLGLVLLIFLQFTRFVKYKNPKLFWVPALGPIITVVVSGVFTFLVKGENHGIQIVGHLDKGINPLSIHLLNFDSKYISPVLKAALITGILSLAEGIAIGRSFAVIDNTPHDGNKEMIAFGLMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAFSNIVQSVLIALTLQFLAPLFGYTPLVALAVIIISAMIGLLDYREMIHLFKVDKFDFVICMAGVLGVAFISMDVGLAMSVGLALLRALLYVARPATCKLGRLTDSGLYRDVEQYPKSSNVHGILIVQLGSPLYYANSNYIKERVLRHIRSEQASGDSVENLILDFSGVTSIDMTGIKGLLELRRVLDKNEIQISIVNPRREVVERLMVSNFVDAMGKDSFFLTLDEAVMATQYSLRKGSRKPDTII 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1957 638 ProSitePatterns SLC26A transporters signature. 103 124 IPR018045 GO:0008271|GO:0008272
Prci1g1957 638 Gene3D STAS domain 485 626 IPR036513 -
Prci1g1957 638 ProSiteProfiles STAS domain profile. 505 623 IPR002645 -
Prci1g1957 638 Pfam STAS domain 510 619 IPR002645 -
Prci1g1957 638 Pfam Sulfate permease family 74 454 IPR011547 GO:0016020
Prci1g1957 638 NCBIfam sulfate permease 61 619 IPR001902 GO:0016020|GO:0055085
Prci1g1957 638 PANTHER SULFATE TRANSPORTER 22 624 IPR001902 GO:0016020|GO:0055085
Prci1g1957 638 SUPERFAMILY SpoIIaa-like 511 620 IPR036513 -
Prci1g1957 638 CDD STAS_SulP_like_sulfate_transporter 506 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1957 Prci-Chr1 40446142 40451152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1957 12 635 Inorganic Solute Cotransporters AT5G19600 60.256 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1957 K17471 - qsa:O6P43_007946 848.966