Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1917 ATGTATCTTTCATCATTAGCGATCCCTGCAACAATCCTTCTCACGTTTCTGTTCATTCTCTCACGGCGTCCAAAACGAAGCAGAGATGGCCAGAATCAGAGAAAGCCACCACCGGGTCCAGCGGCTCTGCCGATCATCGGTAACCTCCACTTGTTGGGTAAACTCCCCCACCGCGACCTTCAATCCTTGGCCAGAAGATACGGACCCATCATGTCCCTTCGGCTAGGACAAGTACCAGTGGTGATAATTTCGTCGTCGGAAGCTACCGAATCTTTGCTCAAGACCAACGACGCCGTTTTCGCCAGCCGTCCCAAGCTTCAAGCTAGCGACATCGTTACTTATGGATCCAAGGGCATCGTGTTTTGCGAGTATGGACCTTACTGGAGGAACATGAGAAAATTGTGTACCTTGCATCTTCTCAGTGCGTCAAAAGTGGAGTCTTTTTCTCCTCTGAGGAGGGAAGAGTTGGACGCGGTGGTAAAATCCCTCGAGGAAGCTGCGGCGGCGCGTGAGGTTGTGGACGTCAGCCAGGTGGTGTCGGAGCTTGTAGAGAATATTACCTATAGGATGATACTGGGTTGTAACAAGGATGACCAACTTGATTTGAAGGGGCATATTCATGAAGCAATGAGGCTCGCCGGAGCTTTTAATCTGACAGATTTCGTGCCTTGGCTAGGGCGGTTTGATCTTCAGGGAATAAAACGAGCCATCACAAAAATCAGTAAAGCACTCGACGAAATACTAGAGAAGATAATTGGAGAGCATGAAGAGGCCATTGACACGTCTAAGGAGCGAGAAGACTTTGTAGACATACTACTTTCGCTGGTGCGCCATTCTGTCGACGGGCAAAACTATGGCATTGACCGAACTAACATTAAGGCTATTGTTTTAGACATGATTGCTGGATCATTTGAAACATCTACCTCCATCATTCTGTGGGCATTATCTGTACTAATAATTCATCCAAGGGTTATGAAAACCCTTCAAGAAGAGTTAGAAACTGTGGTTGGAAGGAACAAGACGGTGGAGGAGACAGACTTGGTAAGGCTTCGTTATTTAGATATGGTGATCAAGGAGACCATGAGATTATATCCTGCAGGATCGCTGATCCCTCGAGTGTCAACAGAGGATGCAGTAGTTGATGGTTACTACTTGGAGAAAAACACAAGAATTATGATCAATATGTGGGCAATAGGACGAGATCCTAAGGTCTGGTTTAACGCAGAAGATTTCTATCCAGAGAGGTTCGTCGACAAGGATGTGGACTATCGTGGACTTGACTTTGAATTCATACCATTTGGATCTGGTCGCAGAGGATGTCCTGGGATACACCTGGGTTTGATTACCGTTAAACTTGTTGTGGCTCAATTGGTTCACTGCTTTAGTTGGGAGATTCCATGGGGACAGGATCCAAATGATTTGGATATGAGTGAGAAATTTGGCTTGTCACTCCCAAGAGCCAAGAACTTGTTTGCTGTGCCAACTTCTCGTATTAAGTCTATTTAA 1506 0.4622 MYLSSLAIPATILLTFLFILSRRPKRSRDGQNQRKPPPGPAALPIIGNLHLLGKLPHRDLQSLARRYGPIMSLRLGQVPVVIISSSEATESLLKTNDAVFASRPKLQASDIVTYGSKGIVFCEYGPYWRNMRKLCTLHLLSASKVESFSPLRREELDAVVKSLEEAAAAREVVDVSQVVSELVENITYRMILGCNKDDQLDLKGHIHEAMRLAGAFNLTDFVPWLGRFDLQGIKRAITKISKALDEILEKIIGEHEEAIDTSKEREDFVDILLSLVRHSVDGQNYGIDRTNIKAIVLDMIAGSFETSTSIILWALSVLIIHPRVMKTLQEELETVVGRNKTVEETDLVRLRYLDMVIKETMRLYPAGSLIPRVSTEDAVVDGYYLEKNTRIMINMWAIGRDPKVWFNAEDFYPERFVDKDVDYRGLDFEFIPFGSGRRGCPGIHLGLITVKLVVAQLVHCFSWEIPWGQDPNDLDMSEKFGLSLPRAKNLFAVPTSRIKSI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1917 501 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 FunFam Cytochrome P450 83B1 25 493 - -
Prci1g1917 501 PANTHER CYTOCHROME P450 93A3-LIKE 15 499 - -
Prci1g1917 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Prci1g1917 501 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 SUPERFAMILY Cytochrome P450 37 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1917 501 Coils Coil 325 345 - -
Prci1g1917 501 CDD CYP71-like 66 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1917 Prci-Chr1 40100407 40103637 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1917 44 498 Monolignol Biosynthesis Gene Families AT4G36220 39.413 8.11e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1917 - - gmx:100782715 597.816