Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1916 ATGTTTCCTTCAACATTAGCGTTTCCTGCTGTCCTCTTCCTCACATTCTTATTCGTTTTATCCACTTCCATACTCTTTCCAAAACGACAACAAGATGATAAGAAACGACCGCCAGGCCCACCGTCCTTCCCGATCATCGGCAATCTCCACATGTTAGGCAAACTTCCCCACATCAGCCTTCGAACGTTGGCCCAAAACTACGGTCCCATCATGTCGTTGAAGCTGGGACAAGTGCCAGCGATTGTCGTTTCATCCGCTGAAGCCGCAGAGCTATTCCTCAAAACTCACGACGCCGTTTTCGCATCGCGACCCCAAATACAAGCGGTAGATCCACTTTCTAGAGGAACCAAGGGATTAGCGTTTGCAGAGTATGGTCCGTACTGGAGATATGTGAGGAAAGTGTGTACCCTCCATCTTCTAAGCACGTCAAGAGTGAAGATGTTAGGTCCTCTGAGGAGGGAGGAAGTGGGGCTGATGGCGAAGTCATTGGAGATCTTTGCGGCGGCGCGTGAGGTGGTGAATCTGAGTGAGGTGGTAGGGGACCTCGTAGAGAATATAATTTATAGGATGATCCTGGGATGTGCTAAGGATGATAAGTCTAACTTAAAAGGGCTTGTTGAGGAGGCACTGAGCTGCGCGGGACAGTTCAATCTGGTTGATTATGTCCCTTGGCTTGGTGTTTTTGATTTCCAGGGTTTGACACAAAAACTAAGGAGAAGCATTAAGGCGCTCGATGATGTGCTGGAAAAGATAGTCAAAGAGCACGAACAAGAACAAGCTTCTAAAGAGGAAAATGTCCGGAACCACATCGACTTCATACACATAATGCTTTCTGTGATACGTCAACCAATGGATTTGCACGACGACCAAAACCATGCCATCGTTGATAGAGATCACCTCAAGGCTATTTTAGCAGATATGATTTTTGCCGCAACTGACACATCTGTCATTGTCATTGACTGGGCTTTATCTGAGCTCTTGAGGCATCCGAGAGTGATGAAAAATCTCCAAAACGAGCTGCAAGATGTGGTTGGAATGAACAGAATGGTGGAAGAGGCTGATTTAGCAAAGTTAGGTTACTTAGATTTGGTAATTAAGGAGACTCTTAGGCTACATCCACCTGCACCTTTACTAATTCCTCGAGAAAGTATGGATGATGTGACAATTAACGGATGTTACATAAGAAAAAAGACAAGGATAATAGTAAATGCATGGGCTATAAGTCGAGATCCTAAAGTATGGTCTGTTAATTATCAATATTTACCATTTGGTTCAGGTCGTAGAAGATGTCCAGGAATTCAAATGGGTATGACTACAGTTAAATATGTTGTGGCTCAATTGATGCATTGCTTTAGTTGGGAGCTTCCTTATGGCATGTGTCCCAGTGACTTGGACATGACTGAAAAGTTTGGCCTCACAGTCCCAAGAAACAAGCATTTACTTGCTGTTCCAACCTATAAATTAGATAATCAGAAACCACCACCAGGCCCACCGTCCCTTCCGATCATCGGCAACCTCCACATGTTGGGCAAACGGCCACACGACAGCCTTCAATCACTGGCCAAAATATACGGTCCGATCATGTCGTTGAAGCTTGGACAAGTTCCTACGGTTGTCGTTTCGTCCCCTGAAGCTGCGGAGCAAATCCTGAAGACGCACGACACCGTTTTTGCATCTCGACCCAAAGTGCAATCAACAGATCCTTTCAAAAAAGGAGTGAGGGGAGTGGTGTTTGCAGAGTACGGTCCATACTGGAGATATGTGAGGAAAGTGTGTACACTTCAACTTCTAAGCGCGTCAAGAGTGCAGATGTCTGCTCCTTTGAGGAGGGAGGAGGTGGTAGCGACGGTGACGGCGCTAGAGAGAGGGGCAGCTGCCGGAGAGGTCGTGGACGTCAGTGAGAAGGTGGGGCAGCTTTTGGAGAACATAATGTACAGGATGGTACTGGGACGTCGTAAGGATGATAGGTTCCAGTTACGTGAGCTCACGAACGAGGTTCTGAACTTGGTGGGACAGTTTAATATTGCTGATTTCATCCCTTGGCTTGGCGTGCTTGATCTCCAGGGTTTGACACGAAAGTTAAGGAGAAACAGAAAGGCACTTGACGATGCATTGGAGAAGATAATCGTTGAGCATGAGCTAGCACCTAAAGAACAAAATGTGCAACACCACAACGACTTCATACACATATTGCTTTCGTTGCTTCATCAACCCATGGATTTGGTGCACGATGATCAAAACCACGTCATTGATAGGGCTAACCTCACAGCTCTTTTATTAGATATGATCATTGCAGCAACCGACTCTTCCTCGGTTGTAATAGAGTGGGCTTTGTCTGAACTCTTGAGGAATCCGAGAGTGATGAAAAATCTCCAAAATGAATTGCAAAAGGTGGTTGGAATGAACAGGATGGTTGAGGAATCTGATGTAGCAAACTTGACTTACTTAGACATGGTAATCAAAGAGACACTTAGGCTGCATCCTGCTGGACCTTTTCTTGTCCCTCGAGAAACTATGGAGGATGTCACGGTTAATGGATATTACATAAGAAAAAAGACGAGGATTATAGTAAATGTATGGGCTATAGGACGAGATCCTAATGTTTGGACTGACAATGCTCATATGTTTTACCCAGAAAGATTTGTTAATTCCGACATAGACGTTCAAGGGCATGATTTCCAACTGTTACCATTTGGTTCGGGTCGTAGAGGATGTGCCGGGACACAATTGGGTCTAGCTACAGTTAAATTTGTTTTAGCTCAATTGGTGCATTGCTTTAATTGGGAGCTTCCTTGTGGCATGTGTCCCAGTGACTTGGACATGAACGAAAATTTTGGTCTCACAATCCCAAGAATGAAGCACTTGCTAGCTATTCCAACTTATCGGTTGCATAATCAGTACCATAACGACTTCATACACATATTGCTTTCGTTGCTGCATCAACCCATGGATTTGCTGCACGATGATCACAACCACGTCATTGATAGGGCTAACCTCACGGCTCTTTCATTAGATATGATCCTCGCGGCCACTGATACTTCCACAGTTGTAATACAGTGGGCTTTGTCTGAACTCTTGAGGAATCCGAGAGTTATGAAAATGTCCAAAATGAATTGCAAAAGGAGGGGTGTAGAGCCTAGCAACTTTCAATCGCTGGCCCAAAAATATGGTCCCATCGTGTCGTTGAAGCTGGGACAAGTTCCTACGATTGTCGTTTCATCCCATGAAGCTGCGGAGCTATTCTTCAAAACACACGACGCCGTTTTTGCATCTCGACCTGACTTACAAGCAGCGGATCCACTTTCTGACGGTATCAAGGGCCTAGCAAGTGTAGAGTACGGTCCGTACTGGAGATATGTGAGGAAAGTGTGTACTCTTCATCTTCTAAGCGCGTCGAGGGTGGAGAAGTTTGCTCCTTTGAGGAGGGACGAAATGGGAGGGATGGCAAAGTCACTGGAGAGAGCTGCGGCGGCGCGTGAGGTCGTGAATCTGAGGGAGGTGGTGGGGGACCTCGTAGAGAATATAATTTATCAGATGATCCTGGGATGTGCAAAGGATGATAAGTCCAACTTAAAAGGGCTTGTTGAGGAGGCATTGAGTTGTACGCAAACGGATTTGAAGGACAAGCAAAAGCATGCCATTGAAAGAGCTCACCTCAAGGTTATTTTGTTAGAGATTATTTTAGCGGCAGGTGACACTTCTAGTGTTGTAATTGATTGGTCTTTATCCGAGATTTTGATGCACCCGAGAGTAGTGAAGAATCTCCAAAACGAGCTCCAAAACGTGGTCAGAATGAACAGAATGGTGGAGGAGGCTGATCTAGCAAGTTTAAGTTACTTAGATTTGGTAATTAAGGAGACTCACAGACTACATGCACTCGCACCTCTAATCAATCGAGAAAGTTTGGAAGATGTCACAGTTAGTGGATATTACAAAAGAAAAAGGTCAAGGATCATCATAAATGTTTGGGCTGTAGGACGAGATCCTAAAGTATGGTCAGATGATGCTTGTATTTTCTATTCAGAGAGGTTCGTTGATAGCAATGTAGACGTTCGAGGACATGATAATCAACTGTTACCATTGGGTTTAGGTCGTAGAATATGTCCAGGAATTTAG 4116 0.4497 MFPSTLAFPAVLFLTFLFVLSTSILFPKRQQDDKKRPPGPPSFPIIGNLHMLGKLPHISLRTLAQNYGPIMSLKLGQVPAIVVSSAEAAELFLKTHDAVFASRPQIQAVDPLSRGTKGLAFAEYGPYWRYVRKVCTLHLLSTSRVKMLGPLRREEVGLMAKSLEIFAAAREVVNLSEVVGDLVENIIYRMILGCAKDDKSNLKGLVEEALSCAGQFNLVDYVPWLGVFDFQGLTQKLRRSIKALDDVLEKIVKEHEQEQASKEENVRNHIDFIHIMLSVIRQPMDLHDDQNHAIVDRDHLKAILADMIFAATDTSVIVIDWALSELLRHPRVMKNLQNELQDVVGMNRMVEEADLAKLGYLDLVIKETLRLHPPAPLLIPRESMDDVTINGCYIRKKTRIIVNAWAISRDPKVWSVNYQYLPFGSGRRRCPGIQMGMTTVKYVVAQLMHCFSWELPYGMCPSDLDMTEKFGLTVPRNKHLLAVPTYKLDNQKPPPGPPSLPIIGNLHMLGKRPHDSLQSLAKIYGPIMSLKLGQVPTVVVSSPEAAEQILKTHDTVFASRPKVQSTDPFKKGVRGVVFAEYGPYWRYVRKVCTLQLLSASRVQMSAPLRREEVVATVTALERGAAAGEVVDVSEKVGQLLENIMYRMVLGRRKDDRFQLRELTNEVLNLVGQFNIADFIPWLGVLDLQGLTRKLRRNRKALDDALEKIIVEHELAPKEQNVQHHNDFIHILLSLLHQPMDLVHDDQNHVIDRANLTALLLDMIIAATDSSSVVIEWALSELLRNPRVMKNLQNELQKVVGMNRMVEESDVANLTYLDMVIKETLRLHPAGPFLVPRETMEDVTVNGYYIRKKTRIIVNVWAIGRDPNVWTDNAHMFYPERFVNSDIDVQGHDFQLLPFGSGRRGCAGTQLGLATVKFVLAQLVHCFNWELPCGMCPSDLDMNENFGLTIPRMKHLLAIPTYRLHNQYHNDFIHILLSLLHQPMDLLHDDHNHVIDRANLTALSLDMILAATDTSTVVIQWALSELLRNPRVMKMSKMNCKRRGVEPSNFQSLAQKYGPIVSLKLGQVPTIVVSSHEAAELFFKTHDAVFASRPDLQAADPLSDGIKGLASVEYGPYWRYVRKVCTLHLLSASRVEKFAPLRRDEMGGMAKSLERAAAAREVVNLREVVGDLVENIIYQMILGCAKDDKSNLKGLVEEALSCTQTDLKDKQKHAIERAHLKVILLEIILAAGDTSSVVIDWSLSEILMHPRVVKNLQNELQNVVRMNRMVEEADLASLSYLDLVIKETHRLHALAPLINRESLEDVTVSGYYKRKRSRIIINVWAVGRDPKVWSDDACIFYSERFVDSNVDVRGHDNQLLPLGLGRRICPGI 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1916 1371 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 898 907 IPR017972 GO:0005506|GO:0016705
Prci1g1916 1371 Gene3D Cytochrome P450 1202 1371 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PANTHER CYTOCHROME P450 93A3-LIKE 489 964 - -
Prci1g1916 1371 Coils Coil 788 808 - -
Prci1g1916 1371 FunFam Predicted protein 1227 1371 - -
Prci1g1916 1371 Pfam Cytochrome P450 1207 1370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Pfam Cytochrome P450 494 954 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Pfam Cytochrome P450 1047 1195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Pfam Cytochrome P450 966 1034 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Pfam Cytochrome P450 37 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Prci1g1916 1371 Coils Coil 333 353 - -
Prci1g1916 1371 Coils Coil 1252 1272 - -
Prci1g1916 1371 PRINTS E-class P450 group I signature 545 566 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS E-class P450 group I signature 754 771 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS E-class P450 group I signature 774 800 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS E-class P450 group I signature 817 835 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS E-class P450 group I signature 895 905 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS E-class P450 group I signature 905 928 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS E-class P450 group I signature 521 540 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 SUPERFAMILY Cytochrome P450 491 962 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 SUPERFAMILY Cytochrome P450 944 1033 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 CDD CYP71-like 524 955 - -
Prci1g1916 1371 PRINTS P450 superfamily signature 765 782 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS P450 superfamily signature 896 905 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 PRINTS P450 superfamily signature 818 829 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Gene3D Cytochrome P450 488 959 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Gene3D Cytochrome P450 27 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 FunFam Cytochrome P450 83B1 485 958 - -
Prci1g1916 1371 SUPERFAMILY Cytochrome P450 1048 1370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Gene3D Cytochrome P450 1037 1201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 FunFam Cytochrome P-450 19 27 484 - -
Prci1g1916 1371 Gene3D Cytochrome P450 960 1035 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 CDD CYP71-like 67 480 - -
Prci1g1916 1371 SUPERFAMILY Cytochrome P450 33 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1916 1371 Coils Coil 687 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1916 Prci-Chr1 40043511 40068379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1916 492 963 Cytochrome P450 AT5G57260 39.545 7.70e-117 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1916 - - pcin:129301104 2697.15