Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1913 ATGTTGCCTTTCCTCCTCCTTCTCCTTCTAGCCGCATTTCTCTTTCTCACTGTATCACTTCTGCTACTATCTCACCTCAACCCAACTAGACGTAACCGGAAACAACCGCCAGGTCCACCGGCCTGGCCGGTGATCGGCAACCTCCACCTGCTGGGTAACCTCCCTCACCGATCCCTTCACTCTCTGGCCAAACGCTATGGTCCCATCATGTCCTTCCGACTAGGACAAGTCCCTGCTGTTATCGTATCTTCCCCCGAAGCTGCGGAGCTGGTGCTCAAGACTAACGACGCCGTTTTCGCAAGCAGGCCAAAAACTCAAGCTTCCGAGTGCCAGTATTACGGGTCCAAGGGCTTAATTTTATCAGAGTATGGTCCCTACTGGCGCAGCATGAGAAAACTGTGTGTTTGGCAGCTGCTTACGGCGTCGAATGTGGAGAAGTCTGGTGCAATAAGAAGGGAGGAGGTGGGAGAGATGGTGAAGTCAATAGATAAATTGGCAGCGGCGAGTGAGGCGGTGGATCTGAGGGAGAAGGTGGAGGAGGTGGTGGAGAACACAATGTATAGGATGATACTGGGGAAGAAGGGGACCTACAGATTTGATGCGAAAAAGCTTGTTCACGAAGCCGTGCGCCTAGCTGGAGTCTTTAATCCTGCAGAGCAATTAAAGAAGAATAGCAAGGAACTTGATGAGATGTTGGAAACGATCATTAAGGAGCACGAGGAGAAAACTGATGAGCAGAAAAATGAAGAAAGAGACTTCGTGGACTTATTGCTATCTTCCAAGGATTTGCCTGACGAACAAAGTCATCACGTCATTGATCAAACCAACGTCAAAGCCATCCTCTTGGACATGATTATTGGCGCATTCGAAACTTCTGTTGCTGTCACTTTATGGGCTTTTTCAGAACTCCTGAGAAATCCAAGGGTGATGAAAAAGCTCCAGCATGAACTAGAAAACATAGTAGGAACAAGCAAACTAGTAGAACATTCTGATTTACCGAGGTTGAGTTACTTGGACATGGTGATTAAGGAGACTATGAGACTATATCCTGTTCTGCCTTTACTGGTCCCTCGTGTGAGCATGGAGGACATCACACTTGATGGATATTACATAAGGAAGAATACACGAGTGATGGTGAATGTATGGGCTATAGGACGAGATCCGGAAATATGGTCAGAAAATGCTCAAGTGTTTTATCCTGAAAGATTCAACAATAGTGATGTAGACCTTAAAGGACATGACTTCCAACTCATACCTTTTGGTTCTGGTCGAAGAGTGTGCCCAGGCATGCAATTGGGTCTGACAGCGGTTAAGTTTATTTTGGCACAATTGGTGCATTGCTTCAATTGGGAGCTTCCACCTGGCATGTCACCCAGTGACATGGATATGACTGAAAAGTTCGGTCTCACAATGCCAAGAGACAGCCCTTTGCTAGCTCTTCCATCTCAACGTGTTGTTATTAATTAA 1467 0.4669 MLPFLLLLLLAAFLFLTVSLLLLSHLNPTRRNRKQPPGPPAWPVIGNLHLLGNLPHRSLHSLAKRYGPIMSFRLGQVPAVIVSSPEAAELVLKTNDAVFASRPKTQASECQYYGSKGLILSEYGPYWRSMRKLCVWQLLTASNVEKSGAIRREEVGEMVKSIDKLAAASEAVDLREKVEEVVENTMYRMILGKKGTYRFDAKKLVHEAVRLAGVFNPAEQLKKNSKELDEMLETIIKEHEEKTDEQKNEERDFVDLLLSSKDLPDEQSHHVIDQTNVKAILLDMIIGAFETSVAVTLWAFSELLRNPRVMKKLQHELENIVGTSKLVEHSDLPRLSYLDMVIKETMRLYPVLPLLVPRVSMEDITLDGYYIRKNTRVMVNVWAIGRDPEIWSENAQVFYPERFNNSDVDLKGHDFQLIPFGSGRRVCPGMQLGLTAVKFILAQLVHCFNWELPPGMSPSDMDMTEKFGLTMPRDSPLLALPSQRVVIN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1913 488 CDD CYP71-like 65 477 - -
Prci1g1913 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Prci1g1913 488 Pfam Cytochrome P450 36 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 FunFam Cytochrome P450 83B1 23 480 - -
Prci1g1913 488 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 Coils Coil 218 252 - -
Prci1g1913 488 Gene3D Cytochrome P450 23 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS E-class P450 group I signature 339 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g1913 488 PANTHER CYTOCHROME P450 93A3-LIKE 10 484 - -
Prci1g1913 488 SUPERFAMILY Cytochrome P450 30 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1913 Prci-Chr1 39988193 39991340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1913 30 486 Cytochrome P450 AT5G57260 39.501 1.95e-119 358