Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1898 ATGCGCCTCAGCTGCAATGGTTGCCGAGTGCTCCGCAAAGGTTGCACCGCTGATTGCCCCATTCGTCCCTGCCTCCTCTGGATTCCCTCTCCTCAATCGCAATCTAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCATCAACCTCGTTCATGCCGGTGCTCCCCATCTTCGCCCAGCGATTTTTAAGTCCTTGCTCTACGAAGCTTGTGGTCGGATTGTGAATCCCATTTTCGGCTCCGCCGGCTTACTCTCTTCCGGAAGCTGGAACCTCTGTCAAGCCGCCGTCGAGGCTGTCCTAAGAGGCGAGCCGATCACGCAGGTTTCGCCCGAATCGGCTTTCGACGGCGTCAGCCCGCTCCTGAAGTTGTGCGATATTCGGCATGTGGGCAAGAAGGGAAATTCGTGCGCCTCGGATAAGTTACACAAGGTGAGGAGTGGGAGCCAGTTTAAACGCTCCGGCGCGAAGCGGAAGAAGCCGGAAGTGGAGCCGGCTGGAGCTGAGCTGATGGCTCGTTCGGGGAGCGAGTTGAATGGTTCGGGGGTGAGCGAGCACAGAAGTGGAAGTCCTGGCGGTGAAGCTGATAGCAGCACCGTCGAGATGACAGAAGGTTGGCCGGAACCGGCGAAGAACGACGAGAGAAGCGAAGCTGAAGCGGAGAATGGGGAGTTAGAGCTGGAGTTGACCATGTGGTGGGGTCAACAAGCTAAGGGTCATACAGATATCAATGGTTCTGATGCGAACACGTGTAAATTAACACTGGGCTCTGATCATTCTGTTTAG 795 0.5686 MRLSCNGCRVLRKGCTADCPIRPCLLWIPSPQSQSNATLFLAKFYGRAGLINLVHAGAPHLRPAIFKSLLYEACGRIVNPIFGSAGLLSSGSWNLCQAAVEAVLRGEPITQVSPESAFDGVSPLLKLCDIRHVGKKGNSCASDKLHKVRSGSQFKRSGAKRKKPEVEPAGAELMARSGSELNGSGVSEHRSGSPGGEADSSTVEMTEGWPEPAKNDERSEAEAENGELELELTMWWGQQAKGHTDINGSDANTCKLTLGSDHSV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1898 264 MobiDBLite consensus disorder prediction 141 264 - -
Prci1g1898 264 MobiDBLite consensus disorder prediction 180 200 - -
Prci1g1898 264 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 232 - -
Prci1g1898 264 MobiDBLite consensus disorder prediction 240 264 - -
Prci1g1898 264 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Prci1g1898 264 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1898 Prci-Chr1 39723522 39724788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1898 1 234 AS2 family AT3G02550 49.167 1.69e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci1g1898 LOB 6.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1898 - - pcin:129288305 530.791