Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1896 ATGAATACACAATCTGGTAGCTGCGGTGTAGACCTCAGAGAAGTAGACAATTTAAGTGCCGTTTCCAATGGAACTAATTTTGGGCATTCAATAGTGACCAGTCACGGTGAGATTGAAGCCAAACATCGAGCGATCCTGGTCAAATGGCTAAATAGTCTTTTTCCTTCATTAAACTTGCCAAAGAATATTAGGGACGATGAGTTAAGAGAATGCTTGAGTGATGGCACAGTTCTATGTCAGATATTAAACAAGTTATCGCCTGGCTCTGTGAATGTGGTTAGTGATGGTGATCAGTCTTCACAATCAAACTCGGAAAATATCAAAAGGTTTCTGGCAGCTATAGACAGTCTTGGGTTGCCTCAGTTTGGTGCAACAGAACTAGAGAAGGGATCTTTGAATCATGTTGTGGACTGCCTTATAAAACTTAGAAGTTTGCATAGCTCTTCGGGAGATGATAACATTTCAGTACTAAGTTTCAAATCAGAGGGTTCCCGTGGACATGCATCTCGTAGTTCTCCAACATCAGGAGAAGAGAATAAAAGATTTTCATCTGAGTCAAAGTCAAAGTTACAACGTGTACTGCGTAGTGCAGGTATTGGCAATTGCTTTTACCCTATGCCAGAGTCGTCAGGGGCACTAACACAGCATGTTGTGCATAAACTCCATGAATCGCATCACGCAGGGCATAAGTTCCATGAGATGTTTCAACTGAAAAATGGAAGCTTGGTAGATATGCCTTCCTCAAAAGTTTCGGAGATAATGAAATCAAACAGTATAGAGAATGCTTCCACTCAGTATATTCTAACTTTCATGAATGGTATTCTAGATGAAAGTGCTGAAAGAAGAAACGGTGAAATACCTTACCGTGTGGTCCCCTTGCTGAAAAAGATTGTCCAGGAAATTGAGCGACGTATATCAATACAGGCAGAACATTTACGAACACAAAACAATATTTTAAAGGTTCGTGATGAAAAATATCAATCAAGAATCAGAGTTCTTGAGGCACTTGCATCTGGAACTAGAGAAGAAAGTGAGATGGTTGCAAGCCAGCTTAAGCAGTTAATGACTGAGAAGACCAAAGTGGAAGAAGAGAAGAAGGCTAGTGAGGAAGAGTTGATTAGGTTGAAGGAAGAGATGGACCACATAACTACAAAATTTTCAACATTGAAGCAAGAGCTAGAAACAACAAAAGACACATGCTTACAGTTGGAAGCAGAAGCTGAGGGTGCCAAAGGAGAACTGAATCAGAAGTCAAAAGAATACGAACTTCAATTAAACGATTTACTCAATAAGGTGAAAGAACTTGAGACTTCTTCTGATTCAAAGTATCATAAATGGAACATGGAGAAGAACCTATTGCAGGAAGCTGTCGATTTTCAATTTAGTTCCCTGCAGAAAATAAAATTGTCTTGGCAATCCATTGTGCAAGATATCTTGAAAGAGCAAAAAATGTACATGGAAGAAAGCAATCAATTAGGTGTAAATCTTAAACCACTAGTGGATGCAGCTAATAATTATCATGTTGTTCTTGCCGAAAATCGAAGACTGTTTAATGAAGTTCAAGAATTGAAAGGTAATATTAGAGTATATTGTCGAATCAGACCATTTATTCCTGGACAAAGGGAAAAGAGATCCATCATACAACATACTAGTGAAAAGGATTTGGTTGTAGCAAACCGCTCCAAACAAGGGAAAGAAGCACTTCGATCATTTAGCTTCAATAAGATCTTTGGTCCAACTACATCTCAAGAGGATGTATATTCTGACATACAACCATTCATACGATCAGTACTTGATGGGTACAATGCATGCATCTTCGCTTATGGCCAGACAGGTTCAGGGAAAACTTACACTATGAGTGGTCCTAATGGAGCAACAGAAGAGACTTATGGTGTTAATTATCGAGCTCTCAATGACCTCTTTAGCATTTCCAGCAGCAGAACAGGCTCCATAGTCTATGAGGTTTGGGTTCAAATGGTTGAGATATATAACGAGCAAGTGCGCGATTTATTGGCAACTGATGCTTCTAAAAAAAGACTTGGGATATTGACCCAACCTCAACCCAAGGGCTTAGCTGTACCTGATGCCAGCATGTTCCGTGTTAATTCAACTTCAGATGTTTTGATGCTAATGGACATTGGACTGAAAAACAGAGCAATGGGGGCAACTGCTATGAATGAAAGGAGTAGTCGTTCGCACAGTGTGGTCTCAATTCATGTTCGTGGGAAAGATATACACTCTGGTTCTTCTCTGCATGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGTTCTGAAGCAACTGGGGATAGGCTTAAGGAAGCGCAGCATATAAACAAATCATTGTCTGCCCTTGGAGATGTCATTTTTGCCCTCGCCCAAAAGAGCTCCCATGTGCCATATAGAAATAGCAAACTTACTCAACTCCTGCAAAGTTCTCTTGGCGGTCATGCAAAGACTCTCATGTTTGTCCAACTTAATCCGGATGTAAATTCATTTTCTGAAAGTCTAAGTACATTAAAGTTTGCTGAGAGGGTCTCTGGAGTTGAATTAGGACAGGCACGAAGCACTGGAGATGGCAAAGATGTTAGAGAACTAATGGAGCAGATAGCTTTTCTCAAAAACACAATTGCATTAAAAGATGAGGAGATTGAGCAGCTACAATCACTTAGAGATGTAAGAAATGTCTGTTCGGAGAGAGCCTTTTTGAGGTATGGATCTCCCTTTAAGGGCAGAGAATCCATAAGCAGATCTCCTAAGAGGGACCATACAGCATCAGGGGGGAGAAATACACAATTAGAAGCTCATTTCCAGCAGTCAATGGATGGCCTAAGACAAGACACTGAATTTTTCCAGTTTCCCAGAGTTGCTGGGAACAGTCCTGATAGGCCAGAGATTTTCCGGTATGCAAGTGAGGATTATGGTGGAAGACTGAGTGATTTTTCCGACGGGGGCTTTGTAGGAACAGAAGCTGACGATTTGTTTGATAATAAAGTTCACACTGAAAACAGAAAATCGCCACTTCGCATGGTGAAATCAAAGCCATCCCCAAAAACTGGCGGAGTACACACAGCTCACAAGAGTCCTCTAAGGGCAAAGATCTTTCGACATGGTAGTGCAGATTATGGGGCAACACCAGGTGATCACTTTTCTGAACGGGGCTTTCGGAGAACCGTCACCGATGATCAGTTTGATAATCAAGTTGTCGCTGAAAACAAAAAATCTCCTTTCCGCACGATGAAATCAAAGGTTGCATCAAAAGTTACTCGAGTTTTGCCGAAAACGACCCAACCCTCACCGACTACCACAAAGGGGACGGCCAAGAAGTCACCAAGAATTAAAAGAAGCAACAGTGGTGGACTTCCAAAAGGCACCATGGGCAGATTAGGAGGGAGATAG 3411 0.4119 MNTQSGSCGVDLREVDNLSAVSNGTNFGHSIVTSHGEIEAKHRAILVKWLNSLFPSLNLPKNIRDDELRECLSDGTVLCQILNKLSPGSVNVVSDGDQSSQSNSENIKRFLAAIDSLGLPQFGATELEKGSLNHVVDCLIKLRSLHSSSGDDNISVLSFKSEGSRGHASRSSPTSGEENKRFSSESKSKLQRVLRSAGIGNCFYPMPESSGALTQHVVHKLHESHHAGHKFHEMFQLKNGSLVDMPSSKVSEIMKSNSIENASTQYILTFMNGILDESAERRNGEIPYRVVPLLKKIVQEIERRISIQAEHLRTQNNILKVRDEKYQSRIRVLEALASGTREESEMVASQLKQLMTEKTKVEEEKKASEEELIRLKEEMDHITTKFSTLKQELETTKDTCLQLEAEAEGAKGELNQKSKEYELQLNDLLNKVKELETSSDSKYHKWNMEKNLLQEAVDFQFSSLQKIKLSWQSIVQDILKEQKMYMEESNQLGVNLKPLVDAANNYHVVLAENRRLFNEVQELKGNIRVYCRIRPFIPGQREKRSIIQHTSEKDLVVANRSKQGKEALRSFSFNKIFGPTTSQEDVYSDIQPFIRSVLDGYNACIFAYGQTGSGKTYTMSGPNGATEETYGVNYRALNDLFSISSSRTGSIVYEVWVQMVEIYNEQVRDLLATDASKKRLGILTQPQPKGLAVPDASMFRVNSTSDVLMLMDIGLKNRAMGATAMNERSSRSHSVVSIHVRGKDIHSGSSLHGNLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSLGGHAKTLMFVQLNPDVNSFSESLSTLKFAERVSGVELGQARSTGDGKDVRELMEQIAFLKNTIALKDEEIEQLQSLRDVRNVCSERAFLRYGSPFKGRESISRSPKRDHTASGGRNTQLEAHFQQSMDGLRQDTEFFQFPRVAGNSPDRPEIFRYASEDYGGRLSDFSDGGFVGTEADDLFDNKVHTENRKSPLRMVKSKPSPKTGGVHTAHKSPLRAKIFRHGSADYGATPGDHFSERGFRRTVTDDQFDNQVVAENKKSPFRTMKSKVASKVTRVLPKTTQPSPTTTKGTAKKSPRIKRSNSGGLPKGTMGRLGGR 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1896 1136 ProSiteProfiles Kinesin motor domain profile. 526 853 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g1896 1136 SMART kinesin_4 524 861 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g1896 1136 Pfam Kinesin motor domain 532 851 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g1896 1136 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 421 IPR027640 GO:0003777|GO:0007018
Prci1g1896 1136 MobiDBLite consensus disorder prediction 161 179 - -
Prci1g1896 1136 PRINTS Kinesin heavy chain signature 803 824 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g1896 1136 PRINTS Kinesin heavy chain signature 600 621 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g1896 1136 PRINTS Kinesin heavy chain signature 723 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g1896 1136 PRINTS Kinesin heavy chain signature 754 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g1896 1136 Coils Coil 351 438 - -
Prci1g1896 1136 Coils Coil 867 894 - -
Prci1g1896 1136 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 468 855 - -
Prci1g1896 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 891 IPR027417 -
Prci1g1896 1136 SUPERFAMILY Calponin-homology domain, CH-domain 38 153 IPR036872 -
Prci1g1896 1136 MobiDBLite consensus disorder prediction 1085 1136 - -
Prci1g1896 1136 MobiDBLite consensus disorder prediction 161 188 - -
Prci1g1896 1136 Gene3D Kinesin motor domain 468 855 IPR036961 -
Prci1g1896 1136 Pfam Calponin homology (CH) domain 42 145 IPR001715 GO:0005515
Prci1g1896 1136 Gene3D - 33 150 IPR036872 -
Prci1g1896 1136 ProSiteProfiles Calponin homology (CH) domain profile. 40 147 IPR001715 GO:0005515
Prci1g1896 1136 MobiDBLite consensus disorder prediction 1009 1031 - -
Prci1g1896 1136 MobiDBLite consensus disorder prediction 915 934 - -
Prci1g1896 1136 SMART ch_5 42 145 IPR001715 GO:0005515
Prci1g1896 1136 MobiDBLite consensus disorder prediction 1093 1111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1896 Prci-Chr1 39711460 39718999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1896 514 887 Calmodulin-binding Proteins AT5G65930 38.400 2.39e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1896 K10406 - qsa:O6P43_008574 1076.23