Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1882 ATGTACACATCAAGGAAGAAAATCCACAAAGATAATGATGCTGAGCCAACTGAGTTTGAAGAGTCAGTTGGGCAGGCATTGTTTGATTTGGAAAATACCAATCAGGAGCTGAAAAGTGATTTGAAAGACCTATACATAAATTCAGCAGTTCAGATTGATGTATCTGGGAACCGCAAGGCTGTGGTTGTCCATGTTCCCTATAGATTAAGGAAGGCTTTTAGGAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGGAAGGATGTAGTTTTGATTGCCACCCGGAGGATATTGAGGCCTCCAAAGAAGGGATCTGCTGTGCAACGTCCTCGAAGCCGTACACTCACTGCTGTGCATGAAGCAATGCTGGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGCATTAGGTACCGAATTGATGGATCCAAGATTATGAAGGTTTTCTTGGACCCAAAGGAGCGAAATAACACTGAGTACAAGCTTGAGACTTTCGCTGCAGTATACAGGAAGCTGTCGGGCAAAGACGTCGTGTTTGAGTATCCTGTCACAGAGGCTTAG 576 0.4444 MYTSRKKIHKDNDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRIRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPVTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1882 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Prci1g1882 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Prci1g1882 191 Coils Coil 27 47 - -
Prci1g1882 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1882 Prci-Chr1 39584225 39587105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1882 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.105 3.77e-115 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1882 K02993 - qsa:O6P43_008566 364.385