Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1875 ATGGCAGCCAAACGGTTCTCACCCGATGATTCTGATCCTGAACCAGACAACCGAAGCGACAAACGCATGAGACCTTCTCGACCTTCTTTTGCTTCGATAATAGGAGAAGTGGTTATGGTGAAGAACATGCAGAACCTTTTCTCTTCCTTAGAGCCTTTGCTCAGACGAGTTGTGACTGAAGAGGTTGAACGAGCGATGAGGCATTGTGCTCCACGTTCGATAACTCGATCTCCTTCTCTGCGAATCGAAGCAATCGATCAGACTCAAGCATCGGGTTATCAGCTAATGTTCAGCAAGAAGCTTTCTCTCCCAATATTCACTGGAACAAGGATTCTGGACAGTGATGGGAAACCTATCCAAGTCATGCTTGTTGAGAAGAACGGTGACCAATTGGTCCGAACCTGTCTCCCCCAACCCCTCAAGCTGGAGCTGGTGGTTCTCGACGGAGACTTCCCCGCCGGCGACAAGGACGCGTGGACCACCGATGAGTTCGATAGACACACAGTGAAGGAGAGAGCTGGGAAGCGACCCTTGCTCACCGGAGAGTTGAACCTTACCATGAGGGATGGGATTGCACCGATCGGTGACATTGAGTTCACCGACAATTCAAGCTGGATTCGGAGCCGGAAATTCCGTGTCGCCGTCAGAGTTGCTCCGGGGAGTAACCTTGGTGTTCGGATTCGTGAGGGCATGACGGAGGCCTTTGTCGTCAAGGATCACCGTGGAGAATTGTACAAGAAACATCATCCGCCAATGTTGGACGACGAAGTGTGGCGTCTGGAGAAGATCGGGAAAGAAGGAGCTTTCCACAAGAAGTTGTCGTCAGCGCATATCAAAACCGTACAAGACTTTCTGAAGCTGTTAAGTATCGATCCTCAGAAACTCAGAGGGATTCTGGGGATGGGGATGTCCGATAAAATGTGGGAAGCGACAGTGAAGCACGCGAGGACATGTGAAATGGGGACCAAGCTCTACTTGTACCGTGGGCCCCACTTCGCCCTCTATTTGACTCCAACCTGCCAGGTCGTCAAAGCTGAAATGAGCGGCCACATCTTCTGGGGCAAGGATATTACGGCTAACTTTAACAGGAACTACATAGAGAAATTGGTGAAGGAAGCATACGCGAAGTGGAATTGCTTGGAGGAAATTGATTCATTTTTGGCGGCTAACATTTCCACACTAACCCAAGGGGAGAACATGGAGCAAATGCCAAACAACAACAACAATCTAGGAATGACATATGATCATCAGGTGGGTTTCTTACAGGAAGGCTACGGAATAGGAACAGATAATGTTCAAATTGGAGGAAGCAGCGAGTGGCCGGCGAATGCGACATTCTCGGCAACATCGTACGTAAATGCTGCCATGTCTTATAACTTCTCAGAGACACAGTCAGATGGCAATATAACACCGTCTGTTTCTCTCATGGATGGGGCTACAACTCCAAGGTGGCCTTGA 1458 0.4945 MAAKRFSPDDSDPEPDNRSDKRMRPSRPSFASIIGEVVMVKNMQNLFSSLEPLLRRVVTEEVERAMRHCAPRSITRSPSLRIEAIDQTQASGYQLMFSKKLSLPIFTGTRILDSDGKPIQVMLVEKNGDQLVRTCLPQPLKLELVVLDGDFPAGDKDAWTTDEFDRHTVKERAGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRVAPGSNLGVRIREGMTEAFVVKDHRGELYKKHHPPMLDDEVWRLEKIGKEGAFHKKLSSAHIKTVQDFLKLLSIDPQKLRGILGMGMSDKMWEATVKHARTCEMGTKLYLYRGPHFALYLTPTCQVVKAEMSGHIFWGKDITANFNRNYIEKLVKEAYAKWNCLEEIDSFLAANISTLTQGENMEQMPNNNNNLGMTYDHQVGFLQEGYGIGTDNVQIGGSSEWPANATFSATSYVNAAMSYNFSETQSDGNITPSVSLMDGATTPRWP 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1875 485 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Prci1g1875 485 PANTHER OS02G0177800 PROTEIN 4 466 IPR012416 GO:0005516
Prci1g1875 485 Pfam Calmodulin binding protein C-terminal domain 323 383 IPR046829 -
Prci1g1875 485 MobiDBLite consensus disorder prediction 1 25 - -
Prci1g1875 485 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Prci1g1875 485 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1875 Prci-Chr1 39480412 39484043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1875 16 384 Calmodulin-binding Proteins AT5G57580 47.849 9.72e-117 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1875 - - vra:106766894 574.318