Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1874 ATGACAAACAATGATCAGCGCATAGAATCCTTCATCAGAAATAATGGACCTCTAACAATAAAAAGATTTACATTTTCAGAAATCAAGAAAATGACCAACTCTTTTGAAGTCAAATTGGGAGAAGGAGGTTATGGTAGAGTATACAAAGGGATTACAATAAAAAATTGCCCAGTGGCCGTGAAGGTATTGAATGCATCCAAAGGGAATGGTGAAGAATTTATCAATGAGGTTGTCAGCATTAGTAGGACTTCACATGTAAATATTGTCACTCTCCTTGGTTTTTGTCTTGAAGGTGGCAAAAAAGCACTTGTGTATGAACTCATGCCAAATGGTTCGCTTGAAAAGTTCATATACAACAGGAAATTGGAGACAAATCCACCCTTGAGTTGGGAAAAATTACTCCAAATTGCTGGAGGGATAGCTAGAGGGCTAGAATACTTGCATAGAGGTTGCAATGCTCGAATCTTGCATTTTGACATAAAACCAAACAATATCCTTTTAGATGAAAATTTTTGCCCAAAAATATCAGATTTTGGATTAGCTAAGCTTTGCTCAAAAACTCACAGTAAAGTGTCAATGTTGGATGCTAGAGGGACTGTTGGGTATATAGCACCAGAAGTATGGAACCGAAATTTTGGAGGTGTCTCTCACAAGTCAGATGTGTATAGTTATGGAATGTTGATTTTGGAAATGGTTGGAGGAAGAAAGAATGTCAATGAAGAATCAAGTTGTTCAAGTGATATATACTTTCCTCATTGGGTATATGGCCAAATTGAGTCAGGCAACAAGATAATAGGGTATGATGATATAACGAGAGAAGAAAGTGAAATTGCAAAGAAGATGATCCTAGTGGGATTATGGTGCATTCAGCCCATGCCATCAGATAGGCCTCCCATGAACAGAGTGATTGAGATGTTGGAAGGGAGCTTGGATCAGCTGTCAATACCACCAAAGCCTTTCATATTTCCACCTACAATTCCAAGAACGGGAGAGGAAAACTTTGCAACAAATGGTGTTCTTTCATTTTCGGCTGATTATCAATGTGGTAGATAG 1053 0.3808 MTNNDQRIESFIRNNGPLTIKRFTFSEIKKMTNSFEVKLGEGGYGRVYKGITIKNCPVAVKVLNASKGNGEEFINEVVSISRTSHVNIVTLLGFCLEGGKKALVYELMPNGSLEKFIYNRKLETNPPLSWEKLLQIAGGIARGLEYLHRGCNARILHFDIKPNNILLDENFCPKISDFGLAKLCSKTHSKVSMLDARGTVGYIAPEVWNRNFGGVSHKSDVYSYGMLILEMVGGRKNVNEESSCSSDIYFPHWVYGQIESGNKIIGYDDITREESEIAKKMILVGLWCIQPMPSDRPPMNRVIEMLEGSLDQLSIPPKPFIFPPTIPRTGEENFATNGVLSFSADYQCGR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1874 350 Pfam Protein kinase domain 36 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1874 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Prci1g1874 350 FunFam PR5-like receptor kinase 108 318 - -
Prci1g1874 350 ProSitePatterns Protein kinases ATP-binding region signature. 39 61 IPR017441 GO:0005524
Prci1g1874 350 Gene3D Transferase(Phosphotransferase) domain 1 108 315 - -
Prci1g1874 350 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Prci1g1874 350 SUPERFAMILY Protein kinase-like (PK-like) 11 307 IPR011009 -
Prci1g1874 350 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 326 IPR045874 GO:0004672
Prci1g1874 350 SMART serkin_6 33 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1874 350 ProSiteProfiles Protein kinase domain profile. 33 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1874 Prci-Chr1 39475302 39478446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1874 4 337 Receptor kinase-like Gene Family AT5G38280 56.598 1.31e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci1g1874 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1874 - - gmx:100781977 488.419