Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1871 ATGTGTCCCAATGAATTCTACAACTTCACGTTGGATTATGCTCTATTTAACTACACTTCCAATGATGTAAATTCCACCTTGTTTATAAACTGCGACCCTTTAGTATCTAAGCCTCCTCCTGTGAATCTGTCAACTTCTTTGGGATTTGATTGCCCCGCAAAAGGTTATCCCAGCGAAGCATACTTTTTGCTGATCAGCGAGAAATGGTTTAATTCGAGTGCTCTGGGATGCAGAAGAATTTCAGGTGGAAGATGTGGGTACAACATAAGTTTGGACGAGTTTACATGTTTCTGTCCCAATCAAAGTAATTATGGGGTTTGCGTTCCTGACCTATTGCTAGGAACACCAACACAAGCACCCTTGCTCCATCAACAGAGGGAGATAAAACTTATAATCATAGGTGCTACGAGCGGAACAACAGCACTATTGCTAATATTTTTTGCTATTTTTTGTTGTTGTACAATCAAAGCACGGAGGAAAAATGTTGATCAAAATATTGAGGCCCTTATTAGAAATCAAGGAGTTCTGGCCGCCACAAGATATAAATTTACTGACATCAAGAAAATCACCAATTCTTTTACAGAGAAATTGGGACAAGGTGGTTATGGTACTGTATACAAAGGAAAACTGATCAACGATTGCCCCGTTGCTGTAAAGATATTGAAGCCATCCAAAGGAGACGGGCAAGAATTTATCAATGAGGTTGCAAGCATGAGTAGAACTTCCCATGTTAATGTTGTTGCCCTTCTTGGTTTTTGTTTAAAAGGTCAGAAAAAGGCTCTCATATATGAATTTATGCCTAATGGATCTCTTGACAAGTTCATTCACAAGGCAAATGGAACTAGTCCATCCTTAACCTGGGAAAATTTGTACAAAATTGCAACTGGGACAGCTTGTGGACTCGAATACTTACACAAGGGATGCAACACTCGAATTCTCCATTTTGATATAAAGTCACATAACATTCTTCTGGATGAAGACTTTTGTCCAAAAATATCAGATTTTGGACTTGCTAAGCTTTGTCCTAGGAAAGAAAGCATCATTTCAATTTCAGAAGCTAGAGGAACAATAGGATATCTTGCTCCAGAAATTTGGAATAAAAATATAGGAAGAGTTTCACATAAATCTGATGTTTACAGTTATGGAATGATGCTGTTAGATATGGTTGGATGGCGGAAGAACATGAATGCAGAAGCCAATTGTAAGACAGAGATTTATTTTCCAGATTGGATTTATGAGAAAATTGAGGAAGGCAGCAATTTGGGACATGATGGGGCAAACACCATGGAAGAAAATGATATTGCAAGGAGAATGACGATTGTGGGTTTGTGGTGTATTCAAACATTTCCAACACAAAGACCTACAATTAGTAGAGTGATTGAAATGTTAGAAGGATGCTTAGACTCTTTACCAATGCCACCAAAGCCTGTCATGGCTTCCCCTCCAAGATTAGAACTTGAATCTTCCACAAGTGACGATACCAACACACAAAAGTTTGACCTCGAAAGCTCTTCCCTAATGCTGGAGAGACACTAG 1536 0.388 MCPNEFYNFTLDYALFNYTSNDVNSTLFINCDPLVSKPPPVNLSTSLGFDCPAKGYPSEAYFLLISEKWFNSSALGCRRISGGRCGYNISLDEFTCFCPNQSNYGVCVPDLLLGTPTQAPLLHQQREIKLIIIGATSGTTALLLIFFAIFCCCTIKARRKNVDQNIEALIRNQGVLAATRYKFTDIKKITNSFTEKLGQGGYGTVYKGKLINDCPVAVKILKPSKGDGQEFINEVASMSRTSHVNVVALLGFCLKGQKKALIYEFMPNGSLDKFIHKANGTSPSLTWENLYKIATGTACGLEYLHKGCNTRILHFDIKSHNILLDEDFCPKISDFGLAKLCPRKESIISISEARGTIGYLAPEIWNKNIGRVSHKSDVYSYGMMLLDMVGWRKNMNAEANCKTEIYFPDWIYEKIEEGSNLGHDGANTMEENDIARRMTIVGLWCIQTFPTQRPTISRVIEMLEGCLDSLPMPPKPVMASPPRLELESSTSDDTNTQKFDLESSSLMLERH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1871 511 MobiDBLite consensus disorder prediction 471 511 - -
Prci1g1871 511 Pfam Protein tyrosine and serine/threonine kinase 193 463 IPR001245 GO:0004672|GO:0006468
Prci1g1871 511 SMART serkin_6 191 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1871 511 FunFam PR5-like receptor kinase 266 474 - -
Prci1g1871 511 ProSiteProfiles Protein kinase domain profile. 191 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1871 511 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Prci1g1871 511 Gene3D Phosphorylase Kinase; domain 1 165 265 - -
Prci1g1871 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Prci1g1871 511 SUPERFAMILY Protein kinase-like (PK-like) 175 464 IPR011009 -
Prci1g1871 511 MobiDBLite consensus disorder prediction 484 503 - -
Prci1g1871 511 PANTHER RUST RESISTANCE KINASE LR10-RELATED 163 487 IPR045874 GO:0004672
Prci1g1871 511 Gene3D Transferase(Phosphotransferase) domain 1 266 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1871 Prci-Chr1 39377461 39396549 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1871 81 491 Receptor kinase-like Gene Family AT1G66910 45.667 6.06e-126 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci1g1871 PK_Tyr_Ser-Thr 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1871 - - pcin:129300041 1047.73