Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1867 ATGACCAAATCTTTTCAAGTTAAATTGGGACAAGGTGGTTATGGTGCTGTATACAAAGGAGAACTACTCAATGGTTGTCCTGTTGCTGTCAAGTTATTGAAGTCATCAAAAGGGAATGGGGAAGACTTCATCAATGAGGTTGCTAGCATCAGTAAAACTTCCCATATAAATGTTGTTACCCTTCTTGGTTTTTGTTTGGAAGGCCAAAAAAAAGCTCTTATATATGAGTTTATGTCAAATGGATCTCTTGACAAGTTCATTAATCAAAATAGGGAAGATAAAACTAGTAGTTCATCCTTGACTTGGGAAAATCTGTACGAAATTGCAATTGGGACAGCTCGAGGACTTGAATACTTGTACAGAGGATGCAACACACGAATTCTGCATTTTGATATAAAGCCACATAACATCTTGTTAGATGAAGGTTTTTGCCCCAAAATCTCAGATTTTGGACTTGCAAAGCTGTGTCCAAGGAAAGAAAGCATTGTTTCAATTTCAGAAGCAAGAGGAACCATTGGATATCTTGCTCCAGAAGTTTGGAATAGAAATATTGGAAGAGTTTCACATAAATCTGATGTTTTTAGTTATGGAATGCTGTTGTTGGACATGGTTGGTGAGAGAAAGGATAATATGAATGTTGAAGACCGCACAACAGAGATTTATTTTCCAGATTGGATTTATGATAAACTTGAGGAAGGCGGCAAGTTGGGACATGATGGGGCAAACACCATGGAAGAAAATGATATTGCAAGGAGAATGACGATTGTGGGTTTGTGGTGTATTCAAACATTTCCAACTCAAAGGCCCACAATTAGTAGAGTTATTGAAATGTTAGAAGGAAGCTTAGACTCTCTAGAAACGCCACCGAAACCTGCCGTGCTTTCCCCTCCAAGATTAGAACAAGAATCTTCTGCAACATGCAATGCCAACTCAGAAGATGTAGATCTCGAAAGCTCTTCCCTAATGTTGGAGACCCACTAG 981 0.3863 MTKSFQVKLGQGGYGAVYKGELLNGCPVAVKLLKSSKGNGEDFINEVASISKTSHINVVTLLGFCLEGQKKALIYEFMSNGSLDKFINQNREDKTSSSSLTWENLYEIAIGTARGLEYLYRGCNTRILHFDIKPHNILLDEGFCPKISDFGLAKLCPRKESIVSISEARGTIGYLAPEVWNRNIGRVSHKSDVFSYGMLLLDMVGERKDNMNVEDRTTEIYFPDWIYDKLEEGGKLGHDGANTMEENDIARRMTIVGLWCIQTFPTQRPTISRVIEMLEGSLDSLETPPKPAVLSPPRLEQESSATCNANSEDVDLESSSLMLETH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1867 326 SMART serkin_6 3 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1867 326 PIRSF ILK 3 288 - -
Prci1g1867 326 Pfam Protein tyrosine and serine/threonine kinase 5 278 IPR001245 GO:0004672|GO:0006468
Prci1g1867 326 Gene3D Phosphorylase Kinase; domain 1 2 78 - -
Prci1g1867 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Prci1g1867 326 MobiDBLite consensus disorder prediction 299 326 - -
Prci1g1867 326 FunFam PR5-like receptor kinase 78 289 - -
Prci1g1867 326 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Prci1g1867 326 Gene3D Transferase(Phosphotransferase) domain 1 79 288 - -
Prci1g1867 326 ProSiteProfiles Protein kinase domain profile. 3 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1867 326 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 301 IPR045874 GO:0004672
Prci1g1867 326 SUPERFAMILY Protein kinase-like (PK-like) 7 279 IPR011009 -
Prci1g1867 326 MobiDBLite consensus disorder prediction 282 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1867 Prci-Chr1 39312314 39313358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1867 1 314 Receptor kinase-like Gene Family AT1G66910 57.321 9.11e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci1g1867 PK_Tyr_Ser-Thr 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1867 - - pcin:129304394 535.413