Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1864 ATGACCCAAAACAACCTCTATTCAATCTTCATCTTCTCCTATTTGTTCGTCAGAGTCAGATTTTGTTCATCTCTTAACCTAAATTTTAAAGCTTGTCAGCCCACTACCTGCGGTAACCTAACCATAAGCTACCCTTTTTACATCGAAGGCCGACAAAAATCCTTTAGTGGAGGCTCGGGTGTCGGCCTTTCTTGTTCCGATAATGGCCTTCCCATCCTCAATATCTTCGGCATCCAGTACTTCATCCATGAAATTTCCTACACCAACCAGTCAATTCGAGTGTCGGAAGCTGCAACCTTGTCGTCAAACAGCAATTCATGTGTGATTCCTCGTATTCACAACATATCCCTTGACGTAACCAGATTCAGTTTCGCTCCGAACCAGATGGACCTATTCCTGATGTTCGAATGCAACCTGGAGTCGCTGCCAGAATATTTTTCCAAGTACAGGATTGGGTGTTCTGCACAAAACGAAGCGACGTCCGTTCTGGCCATAACAGAGGAGGGTGAGGATTTGAGGTCGGCGTCTGAGAAATGTATCGGTGGGGTGGCGACAACGAAAGTGGAAAAGAATTCCAATATTGATGGACAAGTCATGAGAAGAGGGTTTCTCTTGAATTACTATAATGACGCGGAATGCAGTTCATGTCAGGAGACCGGATGGAAATGTGGCTTCAACGGGGACCCTGAAGGTTGCATTTTCAAATGCTATTGCCCAGACAGTGATCCTGATTTGAAATGTGGATCCGAATCCGGACTCGTTGCAGAAAATCCATCGCCGGTGATAGAAAATTCACGGCCTGGCAGGATGAAACTTACAATAGGCATAACAAGTGGAACAATTGGTGGAACATTGCTAATATGCAGTATTATTTTTTGTTGTAAAATCAAATCACTGAGGCAGAAAATAGAGTTCTTTAAGACATCAAGGGCTGACCAAAACATCGAGGCATTCATTAGAAACCAAGGACCTCTAGCTCTTACAAGATATAAATTTGCGGAGGTGAAGAAAATGACCAAATCTTTTCAAGTTAAGTTGGGACAAGGTGGTTATGGTGCTGTATACAAAGGAGAACTACTCAATGGTTGTCCTGTTGCTGTCAAGTTATTAAAGTCATCAAAAGGGAACGGGGAAGAATTTATCAATGAGGTTGCTAGCATCAGCAGAACTTCCCATGTCAATGTTGTCACCCTCCTTGGATTTTGTTTGGAAGGACACAAAAAGGCTCTCATATACGAGTTCATGTCCAATGGATCTCTTGACAAATTTATTCATGATAAGGTAGATAAAACCAGTCCATCTTTGACTTGGGAAAATTTGTACCACATTGCAATTGGAACAGCTCGAGGGCTTGAATACTTGTATAAAGGATGTAACCCACGAATTCTGCATTTTGACATAAAGCCACATAATATTCTTTTAGATGAAAGCTTTTATCCTAAGATCTCAAATTTTGGGCTTGCAAAGTTGTATCCAAGGAAAGAAAGCATCATTTCAATTACAGAAGCTAGAGGAACCATAGGATATCTTGCTCCGGAAGTTTGGAATAGAAATATAGGAGGAATTTCACATAAATCTGATGTTTACAGTTATGGAATGATGCTATTAGATATGGTTGGAGGACGAAAGAACATGAATGATGAAGCCAATTGCACAACTGAGATTTATTTTCCAGATTGGATTTTTGAGAAACTTGAGGAAGGCAGCAATTTGGGAGATGATGGGGCCAACGCCATGGAAGAAAATGATATTGCAAGGAGAATGACGATTGTGGGTTTGTGGTGTACTCAAACATTTCCGACTCAAAGACCTACAATTAGTAGAGTTATTGAAATGTTAGAAGGAAGCTTGGATTCTCTTCCAATGCCACCAAAGCCTGTCATGCCTTCCCCTCCAGCAAGATTAGAACTTGAATCTTCCTCAACTGCAAACACAGAGAAACTCGATCTCGAAAGCTCTTCCCTAATGCTAGAGAGACACTAG 1983 0.414 MTQNNLYSIFIFSYLFVRVRFCSSLNLNFKACQPTTCGNLTISYPFYIEGRQKSFSGGSGVGLSCSDNGLPILNIFGIQYFIHEISYTNQSIRVSEAATLSSNSNSCVIPRIHNISLDVTRFSFAPNQMDLFLMFECNLESLPEYFSKYRIGCSAQNEATSVLAITEEGEDLRSASEKCIGGVATTKVEKNSNIDGQVMRRGFLLNYYNDAECSSCQETGWKCGFNGDPEGCIFKCYCPDSDPDLKCGSESGLVAENPSPVIENSRPGRMKLTIGITSGTIGGTLLICSIIFCCKIKSLRQKIEFFKTSRADQNIEAFIRNQGPLALTRYKFAEVKKMTKSFQVKLGQGGYGAVYKGELLNGCPVAVKLLKSSKGNGEEFINEVASISRTSHVNVVTLLGFCLEGHKKALIYEFMSNGSLDKFIHDKVDKTSPSLTWENLYHIAIGTARGLEYLYKGCNPRILHFDIKPHNILLDESFYPKISNFGLAKLYPRKESIISITEARGTIGYLAPEVWNRNIGGISHKSDVYSYGMMLLDMVGGRKNMNDEANCTTEIYFPDWIFEKLEEGSNLGDDGANAMEENDIARRMTIVGLWCTQTFPTQRPTISRVIEMLEGSLDSLPMPPKPVMPSPPARLELESSSTANTEKLDLESSSLMLERH 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1864 660 MobiDBLite consensus disorder prediction 617 660 - -
Prci1g1864 660 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Prci1g1864 660 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Prci1g1864 660 SMART serkin_6 340 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1864 660 SUPERFAMILY Protein kinase-like (PK-like) 324 614 IPR011009 -
Prci1g1864 660 Gene3D Phosphorylase Kinase; domain 1 316 414 - -
Prci1g1864 660 PANTHER RUST RESISTANCE KINASE LR10-RELATED 310 638 IPR045874 GO:0004672
Prci1g1864 660 Gene3D Transferase(Phosphotransferase) domain 1 415 619 - -
Prci1g1864 660 Pfam Protein tyrosine and serine/threonine kinase 342 613 IPR001245 GO:0004672|GO:0006468
Prci1g1864 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Prci1g1864 660 MobiDBLite consensus disorder prediction 635 651 - -
Prci1g1864 660 Pfam Wall-associated receptor kinase C-terminal 187 240 IPR032872 -
Prci1g1864 660 FunFam PR5-like receptor kinase 415 625 - -
Prci1g1864 660 ProSiteProfiles Protein kinase domain profile. 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1864 Prci-Chr1 39149642 39168823 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1864 1 641 Receptor kinase-like Gene Family AT1G66910 38.496 4.06e-133 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci1g1864 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1864 - - pcin:129304394 1306.58