Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1862 ATGGCGGTCACAAGATATAAATTTACAGACATCATGAAAATCACCAATTCTTTTGAAGCGAAATTGGGACAAGGTGGTTACTGTGTTGTATGCAAAGAAAACTGCTCAATGGTTGACCTGTTAGCTGTAAAAATATTGAAGACACCCAAAGGAAATGAGGAAGAATTTATCAATGAGGCTGCCAGCATCGGTAGAACTTCTCACATTAATGTTGTTACCCTTCTTGGGTTTTGTTTGGAAGGCCGAAAGAAGGTTCTTGTATACGAATTTATGTCTAATGGGTCTCTTGACAAATTCATTCACAAGGAAAATGAAACTATACTTCCATCAAATTGCAATCGGGCTGCTCAAGGGCTTAAATACTTGCACGAGGGATGCAGCACTCAAATTGTACATTTGATATAA 405 0.3802 MAVTRYKFTDIMKITNSFEAKLGQGGYCVVCKENCSMVDLLAVKILKTPKGNEEEFINEAASIGRTSHINVVTLLGFCLEGRKKVLVYEFMSNGSLDKFIHKENETILPSNCNRAAQGLKYLHEGCSTQIVHLI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1862 134 SUPERFAMILY Protein kinase-like (PK-like) 5 132 IPR011009 -
Prci1g1862 134 Gene3D Transferase(Phosphotransferase) domain 1 11 133 - -
Prci1g1862 134 ProSiteProfiles Protein kinase domain profile. 16 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1862 134 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 133 IPR045874 GO:0004672
Prci1g1862 134 Pfam Protein tyrosine and serine/threonine kinase 18 124 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1862 Prci-Chr1 39088400 39088804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1862 6 133 Receptor kinase-like Gene Family AT5G39030 47.368 1.19e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci1g1862 PK_Tyr_Ser-Thr 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1862 - - pcin:129298353 273.478