Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1861 ATGGAAGCCTGGACGCTGTTGCTCTCCTCCTCCTTCTTCTTCCTTTCCTCTTTCCCATTGTCCCACTCTCTGCCATTCGAAGTCTGCCTTTCCCCTGGCCATTGTGGATCACTGCCAGAAATTGGTTACCCTTTCTGGTCTGAGGACATTCTTAGACCCGCTTTTTGTGGCAGCGACGGGTTCCATCTCATGTGTCCGCCAAGAGATGAAGAACAACCTTCCATTGAAATCGATTCACTGACTTTCAATGTTGCACGGGTTAACCTATCTGCTTACGTCATGACGCTGGTGCGAAAAGACCTTGCTCAGGATCCTTGTCATCCAGTTTCTAAAAACACCTCCTTGAGTACCAAGCTCTTTAATCTCGTTATTTCCGAGGCAAATCTCAAGAACGTCACCCTATTCTACCACTGCCCCCAAGACATTTCGATTGGCAGCAACTTCACATGCGCCCAGCCTCTGCCTAACACTGATCCTTATCTTAATCCCCTTGTTTTTTATTCGGAAGACGGCGATCATCTGATGCGGCGATTCCCTGGTCTTAACAATTGCAAGCTAATTATTAAAGTGCCGGTTTCGAAAGAGACTCCTCTGAAACCTCAAGGTGATATTGACGACCTTAAAACAGCCTTGCGTGAAGGGTTTAGTGTGCAGTACAATGTGGCGGAGTCTTGTCAATCATGCATGGTTTCAGAAGGAGCATGTGGATCGAATGAAACATCTCATCAATTTGCCTGTCAATGCCCGGACGGACCTCATGCTCGTAACTGTTCTGATTCTCTTTTGCATTCTCCCAAGAAATTTTCATTGAAAAACAAAGTCATTGTAGGTGCTGTTACTGCTGCATTCGTTGCGATTGTCATGCTCACGGGCTTCTTTTTCTATCAACGTCGAAAGAAGACCAGTTATGCAAAGTCATACATGCAATCACATGCCACTTCTTCTGTTTCATCCATGACAGTGGACCCTGAGATTAATGCAAGTAAATATTTTGGAGTCCCCGTCTTCACATACACTGAACTTGAAGAGGCCACTAACAATTTCGATGAAGCCAGAGAACTTGGAGATGGAGGTTTTGGAACTGTATACTTCGGAAAACTTCGGGACGGTCGCTGTGTTGCGGTGAAGAGATTGTACGAGAACAATTACAAGAGAGTAGAGCAATTCATTAACGAAGTTCAGATCCTGACACGCTTGCGCCACACAAACCTTGTGTCCCTCTATGGCTGCACCTCTCGGCACAGTCGTGAGCTCCTCCTCGTATATGAGTACATTCCCAATGGAACAGTCGCCGATCATCTTCATGGCGATCGAGCAAAGCCAGGCTCACTGCCTTGGAATATCAGAATGAACATAGCCATTGAAACTGCAAGTGCTTTGGCATACCTTCATGCCTCAGACATCATCCATCGTGACGTGAAAACCAACAATATCCTTTTGGACAACCATTTTGTTGTCAAAGTTGCAGACTTTGGACTCTCCCGTCTCTTCCCAGACCATGTCACTCATGTTTCCACAGCCCCACAAGGAACTCCAGGCTATGTCGACCCGGAGTACCATGAGTGTTATAAGCTCACTGACAAAAGTGATGTGTATAGTTTCGGTGTAGTGCTGATTGAGCTGATATCATCTTTGCCAGCTGTGGACATTACGCGGCATCGACATGAGATCAATCTGTCCACCATGGCAATCAACAAGATCCAGAACCGGGCACTGCACGAGCTGGTGGATCCTACGCTTGGGTTTGAGTCAGATCAGAAGGTGAGGAAGATGATTAATGCTGTGGCGGAGCTGGCGTTTCAGTGTTTGCAGAATTTGAAGGATATGAGGCCTTCAATGGAGGAAGTGCTAGAAACGCTGAGGGATATAGAGAGTGATGGGAAGCATAAGAGTAAGCCAGAGGTGATGGATATTTCTGATGATGTTGGGTTGCTCAAGAATGATCTGCCTCCACCTTCATCTGATTCTAATTTGGCAAGCAAGTCTACGACTTCAAATTCTAGCAGTTGA 2010 0.4627 MEAWTLLLSSSFFFLSSFPLSHSLPFEVCLSPGHCGSLPEIGYPFWSEDILRPAFCGSDGFHLMCPPRDEEQPSIEIDSLTFNVARVNLSAYVMTLVRKDLAQDPCHPVSKNTSLSTKLFNLVISEANLKNVTLFYHCPQDISIGSNFTCAQPLPNTDPYLNPLVFYSEDGDHLMRRFPGLNNCKLIIKVPVSKETPLKPQGDIDDLKTALREGFSVQYNVAESCQSCMVSEGACGSNETSHQFACQCPDGPHARNCSDSLLHSPKKFSLKNKVIVGAVTAAFVAIVMLTGFFFYQRRKKTSYAKSYMQSHATSSVSSMTVDPEINASKYFGVPVFTYTELEEATNNFDEARELGDGGFGTVYFGKLRDGRCVAVKRLYENNYKRVEQFINEVQILTRLRHTNLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGDRAKPGSLPWNIRMNIAIETASALAYLHASDIIHRDVKTNNILLDNHFVVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHECYKLTDKSDVYSFGVVLIELISSLPAVDITRHRHEINLSTMAINKIQNRALHELVDPTLGFESDQKVRKMINAVAELAFQCLQNLKDMRPSMEEVLETLRDIESDGKHKSKPEVMDISDDVGLLKNDLPPPSSDSNLASKSTTSNSSS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1861 669 Pfam Wall-associated receptor kinase galacturonan-binding 29 97 IPR025287 GO:0030247
Prci1g1861 669 ProSiteProfiles Protein kinase domain profile. 348 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1861 669 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 320 424 - -
Prci1g1861 669 MobiDBLite consensus disorder prediction 624 669 - -
Prci1g1861 669 Gene3D Transferase(Phosphotransferase) domain 1 425 636 - -
Prci1g1861 669 FunFam Wall-associated receptor kinase-like 20 425 633 - -
Prci1g1861 669 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Prci1g1861 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Prci1g1861 669 Pfam Wall-associated receptor kinase C-terminal 180 251 IPR032872 -
Prci1g1861 669 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 667 IPR044652 GO:0004672
Prci1g1861 669 MobiDBLite consensus disorder prediction 624 641 - -
Prci1g1861 669 MobiDBLite consensus disorder prediction 650 669 - -
Prci1g1861 669 Gene3D Phosphorylase Kinase; domain 1 319 424 - -
Prci1g1861 669 Pfam Protein kinase domain 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1861 669 SMART serkin_6 348 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1861 669 SUPERFAMILY Protein kinase-like (PK-like) 327 620 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1861 Prci-Chr1 39081531 39086809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1861 188 669 Receptor kinase-like Gene Family AT1G25390 50.800 1.60e-155 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci1g1861 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1861 - - qsa:O6P43_008550 717.613