Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1860 ATGGGTTCTCCCTCTGTATTTCTCTTCTTCGCTCTCTTCCTCCCACCATATTTCGCCATTGCTGATGAGCCCTTCTCAGCCTGCGAGCCGTTTACCTGTGGAAACATCACCGACCTGAGTTACCCATTCTGGTTCGATTCACGGCCGGAGTATTGTGGGCATCCAAAGTTCAAGCTGAATTGTCAAGGGGACAATGCTACTATCAACATGGCTTCCCAGGATTTTCGTGTCATCGATGTAAATTCAACCACAAGAACTCTCACAATAGCAAGAATGGATTTGTGGGGCACCAAATGTCCCAATGAATTCAACAACTTCACGCTGGATTATGCTGTGTTTAACTACACTTCCAATGATGTAAATTCCACCATGTTATATAACTGCGACCCTTTAGTATATACGCCTCCTCCTGTGAATCTGTCAACTTCTTTGGAATTTGATTGCCCCGCAAAAGGTTATCCCATCGAAGCATATTTTTTGCTGATCAGCGAGAAATGGTTTAATTGGAGTGCTCTGGGATGCAGAGTTAGTATTATAGTGCCTGTTCTGGGGGTGGCAGTGAAGAGTTTCATGGAGGAAGCCATAGATCCTGGTGATGTGATAGATCAAGGTTTTGAGGTTGAATGGGAACCGACAGAAGGAGGGCTGTGTAATAATTGCAAAATTTCAGGTGGAAGATGTGGGTACAACATAAGTTTGGAAGAGTTTACATGTTTCTGTCCCAATCAAAGTAATTATGGGGTTTGTGTGTCTGACCTATTATCAGGAACACCAACACAAGCACCCTTGCTGCAACCAGAGCCTTATCCTCAAGAACCAGCTGCACCACCACAGAAGAAATTTTCATTGAAAAACAAAGTCATTGTAGGTGCTGTTACTGCTGCATTCGTTGCGATTGTCATGCTCACGGGCTTCTTTTTCTATCAACGTCGAAAGAAGACCAGTTATGCAAAGTCATACATGCAATCACATGCCACTTCTTCTGTTTCATCCATGACAGTGGACCCTGAGATTAATGCAAGTAAATATTTTGGAGTCCCCGTCTTCACATACACTGAACTTGAAGAGGCCACTAACAATTTCGATGAAGCCAGAGAACTTGGAGATGGAGGTTTTGGAACTGTATACTTCGGAAAACTTCGGGACGGTCGCTGTGTTGCGGTGAAGAGATTGTACGAGAACAATTACAAGAGAGTAGAGCAATTCATTAACGAAGTTCAGATCCTGACACGCTTGCGCCACACAAACCTTGTGTCCCTCTATGGCTGCACCTCTCGGCACAGTCGTGAGCTCCTCCTCGTATATGAGTACATTCCCAATGGAACAGTCGCCGATCATCTTCATGGCGATCGAGCAAAGCCAGGCTCACTGCCTTGGAATATCAGAATGAACATAGCCATTGAAACTGCAAGTGCTTTGGCATACCTTCATGCCTCAGACATCATCCATCGTGACGTGAAAACCAACAATATCCTTTTGGACAACCATTTTGTTGTCAAAGTTGCAGACTTTGGACTCTCCCGTCTCTTCCCAGACCATGTCACTCATGTTTCCACAGCCCCACAAGGAACTCCAGGCTATGTCGACCCGGAGTACCATGAGTGTTATAAGCTCACTGACAAAAGTGATGTGTATAGTTTCGGTGTAGTGCTGATTGAGCTGATATCATCTTTGCCAGCTGTGGACATTACGCGGCATCGACATGAGATCAATCTGTCCACCATGGCAATCAACAAGATCCAGAACCGGGCACTGCACGAGCTGGTGGATCCTACGCTTGGGTTTGAGTCAGATCAGAAGGTGAGGAAGATGATTAATGCTGTGGCGGAGCTGGCGTTTCAGTGTTTGCAGAATTTGAAGGATATGAGGCCTTCAATGGAGGAAGTGCTAGAAACGCTGAGGGATATAGAGAGTGATGGGAAGCATAAGAGTAAGCCAGAGGTGATGGATATTTCTGATGATGTTGGGTTGCTCAAGAATGATCTGCCTCCACCTTCATCTGATTCTAATTTGGCAAGCAAGTCTACGACTTCAAATTCTAGCAGTTGA 2049 0.4524 MGSPSVFLFFALFLPPYFAIADEPFSACEPFTCGNITDLSYPFWFDSRPEYCGHPKFKLNCQGDNATINMASQDFRVIDVNSTTRTLTIARMDLWGTKCPNEFNNFTLDYAVFNYTSNDVNSTMLYNCDPLVYTPPPVNLSTSLEFDCPAKGYPIEAYFLLISEKWFNWSALGCRVSIIVPVLGVAVKSFMEEAIDPGDVIDQGFEVEWEPTEGGLCNNCKISGGRCGYNISLEEFTCFCPNQSNYGVCVSDLLSGTPTQAPLLQPEPYPQEPAAPPQKKFSLKNKVIVGAVTAAFVAIVMLTGFFFYQRRKKTSYAKSYMQSHATSSVSSMTVDPEINASKYFGVPVFTYTELEEATNNFDEARELGDGGFGTVYFGKLRDGRCVAVKRLYENNYKRVEQFINEVQILTRLRHTNLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGDRAKPGSLPWNIRMNIAIETASALAYLHASDIIHRDVKTNNILLDNHFVVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHECYKLTDKSDVYSFGVVLIELISSLPAVDITRHRHEINLSTMAINKIQNRALHELVDPTLGFESDQKVRKMINAVAELAFQCLQNLKDMRPSMEEVLETLRDIESDGKHKSKPEVMDISDDVGLLKNDLPPPSSDSNLASKSTTSNSSS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1860 682 Gene3D Transferase(Phosphotransferase) domain 1 438 649 - -
Prci1g1860 682 FunFam Wall-associated receptor kinase-like 20 438 646 - -
Prci1g1860 682 MobiDBLite consensus disorder prediction 637 682 - -
Prci1g1860 682 ProSiteProfiles Protein kinase domain profile. 361 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1860 682 Pfam Protein kinase domain 362 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1860 682 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 680 IPR044652 GO:0004672
Prci1g1860 682 Pfam Wall-associated receptor kinase galacturonan-binding 28 91 IPR025287 GO:0030247
Prci1g1860 682 SMART serkin_6 361 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1860 682 Pfam Wall-associated receptor kinase C-terminal 164 242 IPR032872 -
Prci1g1860 682 SUPERFAMILY Protein kinase-like (PK-like) 340 633 IPR011009 -
Prci1g1860 682 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Prci1g1860 682 MobiDBLite consensus disorder prediction 637 654 - -
Prci1g1860 682 MobiDBLite consensus disorder prediction 663 682 - -
Prci1g1860 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Prci1g1860 682 Gene3D Phosphorylase Kinase; domain 1 332 437 - -
Prci1g1860 682 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 333 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1860 Prci-Chr1 39075967 39086809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1860 286 682 Receptor kinase-like Gene Family AT1G25390 57.349 2.83e-152 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci1g1860 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1860 - - gmx:100800873 753.821