Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1859 ATGTCAAAACCCATGTACATCATTGCTGCTCTCTCCTTCTTGTGCCTCAGGCACCGTATTGCCGATGCATATTCTTCTGTATGTTCCTCTCCTCCTGCTTGCGGCAATGTTTCCGTTCACTATCCTTTCTGGCTGGACAACACTTCCGCCCAAGAATACTGTGGTTACCCTGATTTTGGTCTCAAATGCTCCGATGATGGACCACCCGTTATCACTCTTCCAAGCGACACATACTATGTCACAGATATAAATTACTACCTTTCCACACTCACGCTTGTTGACACGGATGTGGTGAACCAATCCTGCCCCAGAGCACGCCAGAATGTTAGCCTAGAAAACACCCCTCTGAGTATTAATCATTTGGATTTGAACCTCAGTTTCTACTTCAACTGCAGTGTTTCTAATAATAATTATAACATCCCTGCCACCAACACCATAGGGTGTTTGAAAAATGAAGGATCGAAGCAGTCATATGTGTTTGAGACGGGGAGTGAGACGGACGGTTATGAGTGGAATATAGATTGTACAGAGAAGGTGGTGGTGGTGGTGAAGGAGGAAGAGATCAGAAGCATGGACTTGGTAACTGGGTTTGGTGGGGCCATGAACCAAGGGTTTGTGCTTGATTGGGGAAAAGCTAGAGATTGCATGGTGTGTGAGAATTCTGGAGGATATTGTGGCTTCAACCGAACCACCCAGCAGAGGCTGTGCTTTTGCAAAGATGGCAGTATCGCTACCAAAAGCTGCAACAAAGGTGCTGTTACTGCTGCATTCGTTGCGATTGTCATGCTCACGGGCTTCTTTTTCTATCAACGTCGAAAGAAGACCAGTTATGCAAAGTCATACATGCAATCACATGCCACTTCTTCTGTTTCATCCATGACAGTGGACCCTGAGATTAATGCAAGTAAATATTTTGGAGTCCCCGTCTTCACATACACTGAACTTGAAGAGGCCACTAACAATTTCGATGAAGCCAGAGAACTTGGAGATGGAGGTTTTGGAACTGTATACTTCGGAAAACTTCGGGACGGTCGCTGTGTTGCGGTGAAGAGATTGTACGAGAACAATTACAAGAGAGTAGAGCAATTCATTAACGAAGTTCAGATCCTGACACGCTTGCGCCACACAAACCTTGTGTCCCTCTATGGCTGCACCTCTCGGCACAGTCGTGAGCTCCTCCTCGTATATGAGTACATTCCCAATGGAACAGTCGCCGATCATCTTCATGGCGATCGAGCAAAGCCAGGCTCACTGCCTTGGAATATCAGAATGAACATAGCCATTGAAACTGCAAGTGCTTTGGCATACCTTCATGCCTCAGACATCATCCATCGTGACGTGAAAACCAACAATATCCTTTTGGACAACCATTTTGTTGTCAAAGTTGCAGACTTTGGACTCTCCCGTCTCTTCCCAGACCATGTCACTCATGTTTCCACAGCCCCACAAGGAACTCCAGGCTATGTCGACCCGGAGTACCATGAGTGTTATAAGCTCACTGACAAAAGTGATGTGTATAGTTTCGGTGTAGTGCTGATTGAGCTGATATCATCTTTGCCAGCTGTGGACATTACGCGGCATCGACATGAGATCAATCTGTCCACCATGGCAATCAACAAGATCCAGAACCGGGCACTGCACGAGCTGGTGGATCCTACGCTTGGGTTTGAGTCAGATCAGAAGGTGAGGAAGATGATTAATGCTGTGGCGGAGCTGGCGTTTCAGTGTTTGCAGAATTTGAAGGATATGAGGCCTTCAATGGAGGAAGTGCTAGAAACGCTGAGGGATATAGAGAGTGATGGGAAGCATAAGAGTAAGCCAGAGGTGATGGATATTTCTGATGATGTTGGGTTGCTCAAGAATGATCTGCCTCCACCTTCATCTGATTCTAATTTGGCAAGCAAGTCTACGACTTCAAATTCTAGCAGTTGA 1932 0.4627 MSKPMYIIAALSFLCLRHRIADAYSSVCSSPPACGNVSVHYPFWLDNTSAQEYCGYPDFGLKCSDDGPPVITLPSDTYYVTDINYYLSTLTLVDTDVVNQSCPRARQNVSLENTPLSINHLDLNLSFYFNCSVSNNNYNIPATNTIGCLKNEGSKQSYVFETGSETDGYEWNIDCTEKVVVVVKEEEIRSMDLVTGFGGAMNQGFVLDWGKARDCMVCENSGGYCGFNRTTQQRLCFCKDGSIATKSCNKGAVTAAFVAIVMLTGFFFYQRRKKTSYAKSYMQSHATSSVSSMTVDPEINASKYFGVPVFTYTELEEATNNFDEARELGDGGFGTVYFGKLRDGRCVAVKRLYENNYKRVEQFINEVQILTRLRHTNLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGDRAKPGSLPWNIRMNIAIETASALAYLHASDIIHRDVKTNNILLDNHFVVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHECYKLTDKSDVYSFGVVLIELISSLPAVDITRHRHEINLSTMAINKIQNRALHELVDPTLGFESDQKVRKMINAVAELAFQCLQNLKDMRPSMEEVLETLRDIESDGKHKSKPEVMDISDDVGLLKNDLPPPSSDSNLASKSTTSNSSS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1859 643 Gene3D Transferase(Phosphotransferase) domain 1 399 610 - -
Prci1g1859 643 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Prci1g1859 643 FunFam Wall-associated receptor kinase-like 20 399 607 - -
Prci1g1859 643 SUPERFAMILY Protein kinase-like (PK-like) 301 594 IPR011009 -
Prci1g1859 643 ProSiteProfiles Protein kinase domain profile. 322 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1859 643 Gene3D Phosphorylase Kinase; domain 1 293 398 - -
Prci1g1859 643 Pfam Wall-associated receptor kinase galacturonan-binding 28 94 IPR025287 GO:0030247
Prci1g1859 643 Pfam Wall-associated receptor kinase C-terminal 148 241 IPR032872 -
Prci1g1859 643 Pfam Protein kinase domain 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1859 643 SMART serkin_6 322 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1859 643 MobiDBLite consensus disorder prediction 624 643 - -
Prci1g1859 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Prci1g1859 643 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 294 398 - -
Prci1g1859 643 MobiDBLite consensus disorder prediction 598 643 - -
Prci1g1859 643 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 641 IPR044652 GO:0004672
Prci1g1859 643 MobiDBLite consensus disorder prediction 598 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1859 Prci-Chr1 39073283 39086809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1859 34 643 Receptor kinase-like Gene Family AT1G25390 45.070 5.46e-157 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci1g1859 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1859 - - qlo:115964068 733.791