Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1845 ATGGATCCGCAGCCGCCGGCACCACCTTCAACGGCACCCCTCCAGGCCTCTGCAGCTCCGACCATAACAAACGCTGTAAATAATCAGTTGATCTTCCCTGAGTCAGTGGAGAACTCTCCTCGCTCCCGCATTGTTGACAACTGGGTTGATGAGCCTCTCCCTCCTGTTCCTGGAGCCAAGCTTCGTTTGATGTGCAGTTATGGCGGCCACATCATGCCACGTCCACATGACAAGACTCTCTGCTATGTCGGCGGCGACACCAGGATCGTCGTCGTCGATCGGCATTCCTCCCTGAAGGAGCTCTGTGGCAGGCTCTCTCGCACCCTGCTGAATGGCCGACCCTTCACCCTCAAGTACCAACTACCCCATGAAGATCTTGACAATCTCATAACAGTCTCCACCGACGAAGATTTAGAGAACATGATCGAAGAACACGAGCGTTTAACGGCGGCTGCTCCTCCTAGGCCTACAAGGTTAAGGCTGTTTCTGTTTTTCTCTAAGCCAGAGTCCACAGTTTCAATGGGTTCACTCATTGATGATGCCAAGTCAGAGACATGGTTCGTGGACGCTCTCAACAACTCTGGGATTCTCATCCGTGGGGCATCGGATTCTGCTACTGTTGGCGGCGGCGTCCTGAACCTTGATAAGGTTCCAGCTAATGATTCTAGCAACAATCTGGAGGCTCAGGCTGCAGAGTTTCCGGTTGATAACAACAAACAGGTCAAAATTTTGCCAGATGTCCATTCCTTGCCTGACTCGCCTCTGGTGGACAACAGTTCATCATGTGGGTCTTCTTCTTCATCCCCTTCAATGGCTAATCTGCCTCCAATTCGGGTTCGTGTTGTTGAAACCGGTAACAGCAGGCTCCAGGAAGAACAGAGACCAGGGATTGAGGAGCAGTTAGCACAAATGACCTTTGGTGCTAATGGGATTAAGCAAGATGAAGGGTATGTTATGACTATGTTGTCTGCTCCTATGCCTACAATCCCTGCACCTATGACCATGGCATCACCAGCTTTGGTGACTGGTGAGAATATGAATCGGGTCATCTCTGATGATGAAAGATCAGATCAAGCAGTACCAGCAGGGCTTCGGAAGCCTCCTTTGCCTTTGCAGCTTGTGCAACCAAGGACCAGTGGTGGTTTAAATTTGCCTTCTCCAGATTCAGTGGCAAGTGACAGTAGTGTTGCGTCTGCAACCTCTTTCTCGAGGGCTGTTTACTATCAGGACCAAGTACAAGCTGCATATGCAGATCAGAAAGCACCAACATTATCACATCCCAATAAAAGTGAAATATCAGATCACATTCCTGGGTACCAAAGAGAACGAGTTCAGGATTCTAATTACACATTACCCTCACAGTTGGATCAAAGTCAGCAAATCCAGCAGCAGCAGCAGCAACAATTTGTTCATGCAAATACCCATTATATCCCCCATCCTGCAGCTACAGGTCAGGTTCCAATGTCTCCATACTACCCAGTTTATACCACACCTTCACAACAGCAAATTCCTCATCCAATTAATCAGCAGTACCCAGTTTATGTAATGCCTGTAGGACACGCTCAACCATACAACATGGCAGTGCAACCCAATATGGCTGACCCTAGTGTGATAACAACCTCAAGCAGGCCATTAATACCCCAAAGTGTTGCTGGCACTCCACCTGTTTACCCCCCCAAGCCTGCCACAGCTTCCATACCTGAGGTGGCTCAGACTGTTTACAAAGCACCTGTGCCTCCCACTCCGGCATTCGTTCAAATGCCATCTGGGCAATATCAGCAACAACAGTTTGTGGGTGTGCCTCAGATCCATCATCAACCACAGTCCATAGCAGTTGCTTCCTCTTCTGCTGCTGCTCATCCTCCTGTTTCAACAACTAATTATGGTTATGATTATAGTGGACCTGCACAAGAACAAGCATACTACATGCAACAGCAGCAAGCTATTCCTTTGCCTTCTCAATACCAGTCCATGACCCCTGCGGCTGCGGCGGCACTTTCAGATGCATCTACGCAATAA 2019 0.4913 MDPQPPAPPSTAPLQASAAPTITNAVNNQLIFPESVENSPRSRIVDNWVDEPLPPVPGAKLRLMCSYGGHIMPRPHDKTLCYVGGDTRIVVVDRHSSLKELCGRLSRTLLNGRPFTLKYQLPHEDLDNLITVSTDEDLENMIEEHERLTAAAPPRPTRLRLFLFFSKPESTVSMGSLIDDAKSETWFVDALNNSGILIRGASDSATVGGGVLNLDKVPANDSSNNLEAQAAEFPVDNNKQVKILPDVHSLPDSPLVDNSSSCGSSSSSPSMANLPPIRVRVVETGNSRLQEEQRPGIEEQLAQMTFGANGIKQDEGYVMTMLSAPMPTIPAPMTMASPALVTGENMNRVISDDERSDQAVPAGLRKPPLPLQLVQPRTSGGLNLPSPDSVASDSSVASATSFSRAVYYQDQVQAAYADQKAPTLSHPNKSEISDHIPGYQRERVQDSNYTLPSQLDQSQQIQQQQQQQFVHANTHYIPHPAATGQVPMSPYYPVYTTPSQQQIPHPINQQYPVYVMPVGHAQPYNMAVQPNMADPSVITTSSRPLIPQSVAGTPPVYPPKPATASIPEVAQTVYKAPVPPTPAFVQMPSGQYQQQQFVGVPQIHHQPQSIAVASSSAAAHPPVSTTNYGYDYSGPAQEQAYYMQQQQAIPLPSQYQSMTPAAAAALSDASTQ 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1845 672 Gene3D - 78 165 - -
Prci1g1845 672 MobiDBLite consensus disorder prediction 354 394 - -
Prci1g1845 672 MobiDBLite consensus disorder prediction 254 273 - -
Prci1g1845 672 MobiDBLite consensus disorder prediction 376 394 - -
Prci1g1845 672 SUPERFAMILY CAD & PB1 domains 76 175 - -
Prci1g1845 672 SMART PB1_new 75 164 IPR000270 GO:0005515
Prci1g1845 672 PANTHER OS05G0427100 PROTEIN-RELATED 33 501 - -
Prci1g1845 672 CDD PB1_UP2 64 164 - -
Prci1g1845 672 ProSiteProfiles PB1 domain profile. 60 164 IPR000270 GO:0005515
Prci1g1845 672 Pfam PB1 domain 77 164 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1845 Prci-Chr1 38891612 38894465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1845 59 271 MAP Kinase Kinase Kinase AT1G79570 35.514 1.67e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1845 - - qsa:O6P43_008537 671.389