Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1827 ATGGTTGAAGTTATTAGGTGTGCACACTTCGCAATCTATGATGGACATGGAGGCCGGTTGGCTGCTGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCGACAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCAATACTCGAAGGTTTTCGCAAAACAGATGAGTCCCTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTCTGGTTATTGGGACAAAAGGTTTTTGTTGCAAATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAGCTACAACTGATGGATCGGAAAATCACTCAGATGGCATCCATGCATTGAAGGCCATTGTTTTGACAAGAGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGCATTCAGAAGGCTGGCGGTGTTGTGGGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCGCCAGTTCAAGAAGGTGGGTGTAATTGCAACACCAGATATCCATTCTTTTGACTTTACTGATAGAGAGCATTTTATCATCCTTGGCTGTGATGGCCTGTGGGGGGTATTTGGTCCCAGTGATGCAGTTGATTTTGTTCAGAAACTATTGAGTGAGGGGTTGCCTGTGACAGCTGTGAGCCGCCATCTTGTTAGGGAAGCCGTTCGTGAACGGCGCTGTAAGGATAATTGCACTGCAATTGTAATTGTTTTCAAGCGTAAATAG 756 0.459 MVEVIRCAHFAIYDGHGGRLAAEYAQKHLHENVLSTGLPRELLDVKVAKRAILEGFRKTDESLLQESAAGGWQDGATAVCVWLLGQKVFVANIGDAKAVLARSATTDGSENHSDGIHALKAIVLTREHKAIYPQERARIQKAGGVVGSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDFTDREHFIILGCDGLWGVFGPSDAVDFVQKLLSEGLPVTAVSRHLVREAVRERRCKDNCTAIVIVFKRK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1827 251 PANTHER PROTEIN PHOSPHATASE 2C 8 246 IPR015655 GO:0004722|GO:0006470
Prci1g1827 251 CDD PP2Cc 10 248 IPR001932 -
Prci1g1827 251 SMART PP2C_4 2 246 IPR001932 -
Prci1g1827 251 SUPERFAMILY PP2C-like 7 249 IPR036457 -
Prci1g1827 251 Gene3D - 3 251 IPR036457 -
Prci1g1827 251 ProSiteProfiles PPM-type phosphatase domain profile. 1 248 IPR001932 -
Prci1g1827 251 Pfam Protein phosphatase 2C 8 236 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1827 Prci-Chr1 38612649 38618062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1827 4 200 PP2C-type Phosphatase Gene Family AT1G18030 80.711 1.72e-117 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1827 K17500 - vvi:100257757 446.047