Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1826 ATGATTATCAACATCTATTCACTGCTAGTCAGTGTATGGTTGAAGTTATTAGGTGTGCACACTTCGCAATCTATGATGGACATGGAGGCCGGTTGGCTGCTGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCGACAGGATTACCACTTAGATGTAAAGGTAGCTAAAAGAGCAATACTCGAAGGTTTTCGCAAAACAGATGAGTCCCTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTCTGGTTATTGGGACAAAAGGTTTTTGTTGCAAATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAGCTACAACTGATGGATCGGAAAATCACTCAGATGGCATCCATGCATTGAAGGCCATTGTTTTGACAAGAGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGCATTCAGAAGGCTGGCGGTGTTGTGGGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCGCCAGTTCAAGAAGGTGGGTGTAATTGCAACACCAGATATCCATTCTTTTGACTTTACTGATAGAGAGCATTTTATCATCCTTGGCTGTGATGGCCTGTGGGGGGTATTTGGTCCCAGTGATGCAGTTGATTTTGTTCAGAAACTATTGAGTGAGGGGTTGCCTGTGACAGCTGTGAGCCGCCATCTTGTTAGGGAAGCCGTTCGTGAACGGCGCTGTAAGGATAATTGCACTGCAATTGTAATTGTTTTCAAGCGTAAATAG 783 0.4534 MIINIYSLLVSVWLKLLGVHTSQSMMDMEAGWLLNMLKSICMKMFFRQDYHLDVKVAKRAILEGFRKTDESLLQESAAGGWQDGATAVCVWLLGQKVFVANIGDAKAVLARSATTDGSENHSDGIHALKAIVLTREHKAIYPQERARIQKAGGVVGSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDFTDREHFIILGCDGLWGVFGPSDAVDFVQKLLSEGLPVTAVSRHLVREAVRERRCKDNCTAIVIVFKRK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1826 260 SUPERFAMILY PP2C-like 35 258 IPR036457 -
Prci1g1826 260 Pfam Protein phosphatase 2C 56 245 IPR001932 -
Prci1g1826 260 SMART PP2C_4 4 255 IPR001932 -
Prci1g1826 260 PANTHER PROTEIN PHOSPHATASE 2C 52 255 IPR015655 GO:0004722|GO:0006470
Prci1g1826 260 ProSiteProfiles PPM-type phosphatase domain profile. 1 257 IPR001932 -
Prci1g1826 260 Gene3D - 19 260 IPR036457 -
Prci1g1826 260 CDD PP2Cc 58 257 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1826 Prci-Chr1 38612649 38618068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1826 52 209 PP2C-type Phosphatase Gene Family AT1G18030 79.747 6.43e-89 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1826 K17500 - vvi:100257757 373.244