Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1825 ATGATGGACATGGAGGCCGGTTGGCTGCTGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCGACAGGATTACCACTTAGATGTAAAGGTAGCTAAAAGAGCAATACTCGAAGGTTTTCGCAAAACAGATGAGTCCCTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTCTGGTTATTGGGACAAAAGGTTTTTGTTGCAAATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAGCTACAACTGATGGATCGGAAAATCACTCAGATGGCATCCATGCATTGAAGGCCATTGTTTTGACAAGAGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGCATTCAGAAGGCTGGCGGTGTTGTGGGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCGCCAGTTCAAGAAGGTGGGTGTAATTGCAACACCAGATATCCATTCTTTTGACTTTACTGATAGAGAGCATTTTATCATCCTTGGCTGTGATGGCCTGTGGGGGGTATTTGGTCCCAGTGATGCAGTTGATTTTGTTCAGAAACTATTGAGTGAGGGGTTGCCTGTGACAGCTGTGAGCCGCCATCTTGTTAGGGAAGCCGTTCGTGAACGGCGCTGTAAGGATAATTGCACTGCAATTGTAATTGTTTTCAAGCGTAAATAG 711 0.4613 MMDMEAGWLLNMLKSICMKMFFRQDYHLDVKVAKRAILEGFRKTDESLLQESAAGGWQDGATAVCVWLLGQKVFVANIGDAKAVLARSATTDGSENHSDGIHALKAIVLTREHKAIYPQERARIQKAGGVVGSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDFTDREHFIILGCDGLWGVFGPSDAVDFVQKLLSEGLPVTAVSRHLVREAVRERRCKDNCTAIVIVFKRK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1825 236 ProSiteProfiles PPM-type phosphatase domain profile. 1 233 IPR001932 -
Prci1g1825 236 PANTHER PROTEIN PHOSPHATASE 2C 32 231 IPR015655 GO:0004722|GO:0006470
Prci1g1825 236 SUPERFAMILY PP2C-like 13 234 IPR036457 -
Prci1g1825 236 Pfam Protein phosphatase 2C 32 221 IPR001932 -
Prci1g1825 236 CDD PP2Cc 34 233 IPR001932 -
Prci1g1825 236 SMART PP2C_4 1 231 IPR001932 -
Prci1g1825 236 Gene3D - 10 236 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1825 Prci-Chr1 38612649 38618338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1825 28 185 PP2C-type Phosphatase Gene Family AT1G18030 79.747 3.11e-89 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1825 K17500 - vvi:100257757 373.244