Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1824 ATGAGCTTAAGCTCGCAGTCTCAGTCTGCCAGTGCAATTGGGAGTGTAAATGTGGAGCCTCAGGACCCAAAATCAAACCCTAATCACAAGCGGGAGGCTTATTCAGAAACTCATGATCCGACTGCGAAAAAATCGAGAACTGAAGCTGCCGGCAGTGAAGAAGGGAACTCAGGAGCTGTTTCAGGTCAACAGAACGCAAAGGAACTAACTTTTGAGATTGAGGCGGATGCAGCTGAGGATAAGGGGTCTAGGCATACGATGGAAGATGCCTGGGTAGTGATTTTGGACGCCAGTTTAGATCATCCTGGAAAACTGAGGTGTGCACACTTCGCAATCTATGATGGACATGGAGGCCGGTTGGCTGCTGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCGACAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCAATACTCGAAGGTTTTCGCAAAACAGATGAGTCCCTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTCTGGTTATTGGGACAAAAGGTTTTTGTTGCAAATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAGCTACAACTGATGGATCGGAAAATCACTCAGATGGCATCCATGCATTGAAGGCCATTGTTTTGACAAGAGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGCATTCAGAAGGCTGGCGGTGTTGTGGGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCGCCAGTTCAAGAAGGTGGGTGTAATTGCAACACCAGATATCCATTCTTTTGACTTTACTGATAGAGAGCATTTTATCATCCTTGGCTGTGATGGCCTGTGGGGGGTATTTGGTCCCAGTGATGCAGTTGATTTTGTTCAGAAACTATTGAGTGAGGGGTTGCCTGTGACAGCTGTGAGCCGCCATCTTGTTAGGGAAGCCGTTCGTGAACGGCGCTGTAAGGATAATTGCACTGCAATTGTAATTGTTTTCAAGCGTAAATAG 1056 0.4688 MSLSSQSQSASAIGSVNVEPQDPKSNPNHKREAYSETHDPTAKKSRTEAAGSEEGNSGAVSGQQNAKELTFEIEADAAEDKGSRHTMEDAWVVILDASLDHPGKLRCAHFAIYDGHGGRLAAEYAQKHLHENVLSTGLPRELLDVKVAKRAILEGFRKTDESLLQESAAGGWQDGATAVCVWLLGQKVFVANIGDAKAVLARSATTDGSENHSDGIHALKAIVLTREHKAIYPQERARIQKAGGVVGSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDFTDREHFIILGCDGLWGVFGPSDAVDFVQKLLSEGLPVTAVSRHLVREAVRERRCKDNCTAIVIVFKRK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1824 351 SMART PP2C_4 64 346 IPR001932 -
Prci1g1824 351 CDD PP2Cc 78 348 IPR001932 -
Prci1g1824 351 Pfam Protein phosphatase 2C 78 336 IPR001932 -
Prci1g1824 351 FunFam Probable protein phosphatase 2C 67 62 350 - -
Prci1g1824 351 MobiDBLite consensus disorder prediction 1 64 - -
Prci1g1824 351 PANTHER PROTEIN PHOSPHATASE 2C 37 346 IPR015655 GO:0004722|GO:0006470
Prci1g1824 351 MobiDBLite consensus disorder prediction 24 50 - -
Prci1g1824 351 Gene3D - 57 350 IPR036457 -
Prci1g1824 351 MobiDBLite consensus disorder prediction 1 23 - -
Prci1g1824 351 ProSiteProfiles PPM-type phosphatase domain profile. 74 348 IPR001932 -
Prci1g1824 351 SUPERFAMILY PP2C-like 73 349 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1824 Prci-Chr1 38612649 38618621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1824 24 300 PP2C-type Phosphatase Gene Family AT1G18030 68.512 1.24e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1824 K17500 - qsa:O6P43_008526 535.798