Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1816 ATGGCGGAAGTGGAGCTGATCGCCACTCCTCAGAGCTTTCCCTGCGCCAGAATCGAATGGGCTTTGAAGATGAAGGGGGTGGAATACGAATACATCAAAGAAAATCTACTCGCCAAAAGCGATCTGCTTCTTCAGTCCAATCCTGTGCACAAGAAGGTACCTGTAATTCTCCATAACGGCTTACCTATTGCTGAATCCCTCGTCATCCTCGAGTACATCGACGAGACTTGGAAGCAAAACCCTTTGCTACCATACGATCCTTTTAAACGAGCCCATGCTCGTTTCTGGGCGAGATTTATCGATGAGAAGTGCGTGAGTGCTGTGTGGGGAGCTGGCGTGGCACAAGGAGAAGGAAAAGAGAAAGCCATAGAATCAGCTCTGGAATCGCTAGCACTTCTGGATAAGCAGGTTGAAGGGAAGAAGTATTTTGGAGGAGAAGAGTTAGGGTATTTGGACATTGTAGCAGGTTGGATTCCTCATTGGCTTAATGTCTTGGAACAGCTTGGAGACATGGAACTGCTCACTGCTGAGAGGTTCCCTCATCTTCATGAATGGAGCCTCAACTTGTTGCAGACTTCACCTGTCAAACATGGCTTGCCTCCCAGAGAATCTGTTGTTGACTACTTCAGTTTCGGCTTTAACTATGTGCGTTCCATGGCAGCCAATAAATCAGGATGA 678 0.4749 MAEVELIATPQSFPCARIEWALKMKGVEYEYIKENLLAKSDLLLQSNPVHKKVPVILHNGLPIAESLVILEYIDETWKQNPLLPYDPFKRAHARFWARFIDEKCVSAVWGAGVAQGEGKEKAIESALESLALLDKQVEGKKYFGGEELGYLDIVAGWIPHWLNVLEQLGDMELLTAERFPHLHEWSLNLLQTSPVKHGLPPRESVVDYFSFGFNYVRSMAANKSG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1816 225 SUPERFAMILY GST C-terminal domain-like 75 212 IPR036282 -
Prci1g1816 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 205 IPR045073 -
Prci1g1816 225 FunFam Tau class glutathione S-transferase 83 219 - -
Prci1g1816 225 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Prci1g1816 225 Pfam Glutathione S-transferase, N-terminal domain 16 75 IPR004045 -
Prci1g1816 225 SFLD Main (cytGST) 1 219 - -
Prci1g1816 225 FunFam Tau class glutathione S-transferase 1 85 - -
Prci1g1816 225 CDD GST_N_Tau 15 77 - -
Prci1g1816 225 Pfam Glutathione S-transferase, C-terminal domain 118 188 IPR004046 -
Prci1g1816 225 Gene3D Glutaredoxin 1 82 - -
Prci1g1816 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 208 IPR010987 -
Prci1g1816 225 CDD GST_C_Tau 87 211 IPR045074 GO:0004364|GO:0006749
Prci1g1816 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Prci1g1816 225 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Prci1g1816 225 Gene3D - 83 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1816 Prci-Chr1 38545873 38548064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1816 3 209 Glutathione S-transferase Gene Family AT2G29420 42.995 5.18e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1816 K00799 - gmx:547587 347.436